HHsearch alignment for GI: 254780269 and conserved domain: TIGR00667

>TIGR00667 aat leucyl/phenylalanyl-tRNA--protein transferase; InterPro: IPR004616 Leucyl/phenylalanyl-tRNA--protein transferase 2.3.2.6 from EC transfers a Leu or Phe to the amino end of certain proteins to enable degradation. The N-terminal residue controls the biological half-life of many proteins via the N-end rule pathway.; GO: 0016755 transferase activity transferring amino-acyl groups, 0030163 protein catabolic process.
Probab=100.00  E-value=5.5e-41  Score=271.84  Aligned_cols=166  Identities=35%  Similarity=0.679  Sum_probs=157.2

Q ss_pred             CCCCEEEEECCCCCEEEEH----HHCCCCHHHHHHHHCCCCEEEECCCHHHHHHHHHCCCC---CCCCCCCHHHHHHHHH
Q ss_conf             7887078873996187424----44611745776521588168766988999999850266---8899872699999999
Q gi|254780269|r    5 ANSQDISWIKPLRRGIIPL----ETFHTPKRLKKYIRRELYDIRINTAFESVISACAQKTQ---KRPTTWINMTIQKAYI   77 (179)
Q Consensus         5 ~d~~~i~WwsP~~R~il~~----~~~hisrsLrk~lrk~~~~itin~~F~~VI~~Ca~~r~---~~~~TWI~~~i~~aY~   77 (179)
T Consensus        20 ~~~~~~~w~~~~p~~~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gc~~~~pg~p~~~~~w~~~~~~~~~~   99 (212)
T TIGR00667        20 DPGDGLLWWSPDPRAALWPLTEDDGLHPAKSLKRFLKKNPFRVSVNLAFGEVIEGCAGDRPGSPERDGTWLSDELVEAYH   99 (212)
T ss_pred             CCCCCCEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf             68885100267864212002343221025778887640444100234567888654204788842000244578999988


Q ss_pred             HHHHCCCEEEEEEEECCCEEEEEEEEEECCCEEEEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHCCCEE
Q ss_conf             99864982699996537201211023205721200344525768999999999999968973999075893477119798
Q gi|254780269|r   78 DLFYMGYAHTIEAWKKDVLVGGLYGVSLGAVFFGESMFSHMENASKICLTHLVKHLKKRQFLLLDIQFITNHLRQFGAIE  157 (179)
Q Consensus        78 ~Lh~~G~aHSvE~w~~~~LvGGlyGv~iG~~F~GESMFs~~~nASKiAl~~L~~~l~~~g~~liD~Q~~t~HL~slGa~~  157 (179)
T Consensus       100 ~~~~~g~~~~~~~w~g~~~~gg~~g~~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~p~~~~~g~~~  179 (212)
T TIGR00667       100 ELHELGWAHSFEVWQGDELAGGLLGLALGGLFCGESLFSRLTNASKVALLYLCEHLDRHGGQLLDCQLLNPHLASLGAYE  179 (212)
T ss_pred             HHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEHHHCCCHHHHCCCCC
T ss_conf             88763020000001320122024433431234322344320121157888888876302420000111040233303311


Q ss_pred             ECHHHHHHHHHHH
Q ss_conf             3699999999999
Q gi|254780269|r  158 ITHVQYAKLLENA  170 (179)
Q Consensus       158 i~r~~fl~~L~~a  170 (179)
T Consensus       180 ~~~~~~~~~~~~~  192 (212)
T TIGR00667       180 VPDKDYKNYLNQK  192 (212)
T ss_pred             CCHHHHHHHHHHH
T ss_conf             2157788777688