HHsearch alignment for GI: 254780270 and conserved domain: CHL00081

>CHL00081 chlI Mg-protoporyphyrin IX chelatase.
Probab=99.21  E-value=4e-09  Score=87.94  Aligned_cols=229  Identities=16%  Similarity=0.228  Sum_probs=141.9

Q ss_pred             HHCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHH-------C----------------------
Q ss_conf             20116899999999999984244467359986056565027999999770-------8----------------------
Q gi|254780270|r  341 HFGLEKVKERIIEYLAVQMRVIKNKGLILCFVGPPGVGKTSLAQSIAKAT-------G----------------------  391 (820)
Q Consensus       341 hyGl~~vK~rile~lav~~~~~~~~g~il~l~gppgvGKts~~~sia~al-------~----------------------  391 (820)
T Consensus        14 IvGQe~~k~aLl----l~av~p~iGg--VLi~G~~GtgKStlvRala~lLP~i~~v~~~~f~~~p~~p~~~~~~~~~~~~   87 (347)
T CHL00081         14 IVGQEEMKLALL----LNVIDPKIGG--VMIMGDRGTGKSTTIRALVDLLPEIEVVKNDPFNSDPRDPDLMSDEVRERIR   87 (347)
T ss_pred             HCCHHHHHHHHH----HHHCCCCCCE--EEEECCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCHHHHHHHC
T ss_conf             538499999999----9825788786--9987899874999999999857874220688767898981002426665431


Q ss_pred             -----------CCEEEEECCCCCC--------HHHHCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECHHHHHHHCCCC
Q ss_conf             -----------8249986188888--------888356320014567128999998327887399993315542311771
Q gi|254780270|r  392 -----------RQYVRMSLGGVYD--------EADIRGHRRTYIGSMPGRIIQSLKRAKRSNPLLLLDEIDKMGSDLRGD  452 (820)
Q Consensus       392 -----------r~f~~islgg~~d--------~~~i~gh~~ty~ga~pg~ii~~l~~~~~~npv~~ldeidk~~~~~~gd  452 (820)
T Consensus        88 ~~~~~~~~~~~~p~v~lPlgaTEDrv~GslDie~al~~G~~~---f~pGlLa------~A~rGiLyvDEINll~d~----  154 (347)
T CHL00081         88 NGEKIPTKKIKIPMVDLPLGATEDRVCGTIDIEKALTEGVKA---FEPGLLA------KANRGILYVDEVNLLDDH----  154 (347)
T ss_pred             CCCCCCCEECCCCEEECCCCCCCCEECCCHHHHHHHHCCCCC---CCCCHHH------HCCCCEEEEEHHHHHHHH----
T ss_conf             466675211468625368888523011400099898458711---5653122------203885886145432379----


Q ss_pred             HHHHHHHHCCCCCCCCEEEEEC-CCCCCCCCEEEEEECCCC--CCCHHHCCCEE-EEEECC-CCHHHHHHHHHHHHH---
Q ss_conf             1556655406001681332010-352364427999934865--54413117247-998258-786899989998608---
Q gi|254780270|r  453 PSAALLEVLDPAQNSSFVDHYL-EVEYDLSDVMFIMTANTL--NIPLPLMDRME-IIRIAG-YTEEEKLQIAKNHLV---  524 (820)
Q Consensus       453 p~~allevldp~qn~~f~d~y~-~~~~dls~v~fi~tan~~--~i~~~l~drme-~i~~~~-y~~~ek~~i~~~~l~---  524 (820)
T Consensus       155 ~v~~LLda~a~G~~~VEReG~S~~~P---a~F~liaT~NPeEgeLrp~llDRF~l~v~v~~~~~~e~R~eiv~~r~~f~~  231 (347)
T CHL00081        155 LVDILLDSAASGWNTVEREGISIRHP---ARFVLIGSGNPEEGELRPQLLDRFGMHAEIRTVKDPELRVKIVEQRSNFDK  231 (347)
T ss_pred             HHHHHHHHHHCCEEEECCCCEEECCC---CCEEEEECCCCCCCCCCHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHH
T ss_conf             99999999855808980464233057---500688557865567488888263226745887898999999999997651


Q ss_pred             ----------------HHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCH
Q ss_conf             ----------------9899862578131322899999997317741023478887999989876542117852012796
Q gi|254780270|r  525 ----------------KKVLTEHALKQEECCISDGVLLDIIRLFTHEAGVRSFERALMKIARKAVTKIVKNSDTTVSINE  588 (820)
Q Consensus       525 ----------------p~~~~~~~~~~~~~~~~~~~i~~ii~~Yt~EaGvR~l~r~i~~i~r~~~~~~~~~~~~~~~i~~  588 (820)
T Consensus       232 ~p~~f~~~~~~~~~~l~~~I~~Ar~~L~~V~v~~~~~~~i~~~~-~~~~v~g~RA~I~l~raARA~AAL~GR~---~V~~  307 (347)
T CHL00081        232 NPENFREKYSESQDALKTQIILARQLLPNVEIDYDLRVKISQIC-SELDVDGLRGDIVTNRAAKALAAFNGRD---EVTP  307 (347)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH-HHHCCCCCCHHHHHHHHHHHHHHHCCCC---CCCH
T ss_conf             96999999887899999999999864477355999999999999-9848998718999999999999986998---3689


Q ss_pred             HHHHHHH
Q ss_conf             7867530
Q gi|254780270|r  589 NNLQDYL  595 (820)
Q Consensus       589 ~~l~~~l  595 (820)
T Consensus       308 eDv~~aa  314 (347)
T CHL00081        308 GDIEKVI  314 (347)
T ss_pred             HHHHHHH
T ss_conf             9999999