HHsearch alignment for GI: 254780270 and conserved domain: CHL00081
>CHL00081 chlI Mg-protoporyphyrin IX chelatase.
Probab=99.21 E-value=4e-09 Score=87.94 Aligned_cols=229 Identities=16% Similarity=0.228 Sum_probs=141.9
Q ss_pred HHCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHH-------C----------------------
Q ss_conf 20116899999999999984244467359986056565027999999770-------8----------------------
Q gi|254780270|r 341 HFGLEKVKERIIEYLAVQMRVIKNKGLILCFVGPPGVGKTSLAQSIAKAT-------G---------------------- 391 (820)
Q Consensus 341 hyGl~~vK~rile~lav~~~~~~~~g~il~l~gppgvGKts~~~sia~al-------~---------------------- 391 (820)
T Consensus 14 IvGQe~~k~aLl----l~av~p~iGg--VLi~G~~GtgKStlvRala~lLP~i~~v~~~~f~~~p~~p~~~~~~~~~~~~ 87 (347)
T CHL00081 14 IVGQEEMKLALL----LNVIDPKIGG--VMIMGDRGTGKSTTIRALVDLLPEIEVVKNDPFNSDPRDPDLMSDEVRERIR 87 (347)
T ss_pred HCCHHHHHHHHH----HHHCCCCCCE--EEEECCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCHHHHHHHC
T ss_conf 538499999999----9825788786--9987899874999999999857874220688767898981002426665431
Q ss_pred -----------CCEEEEECCCCCC--------HHHHCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECHHHHHHHCCCC
Q ss_conf -----------8249986188888--------888356320014567128999998327887399993315542311771
Q gi|254780270|r 392 -----------RQYVRMSLGGVYD--------EADIRGHRRTYIGSMPGRIIQSLKRAKRSNPLLLLDEIDKMGSDLRGD 452 (820)
Q Consensus 392 -----------r~f~~islgg~~d--------~~~i~gh~~ty~ga~pg~ii~~l~~~~~~npv~~ldeidk~~~~~~gd 452 (820)
T Consensus 88 ~~~~~~~~~~~~p~v~lPlgaTEDrv~GslDie~al~~G~~~---f~pGlLa------~A~rGiLyvDEINll~d~---- 154 (347)
T CHL00081 88 NGEKIPTKKIKIPMVDLPLGATEDRVCGTIDIEKALTEGVKA---FEPGLLA------KANRGILYVDEVNLLDDH---- 154 (347)
T ss_pred CCCCCCCEECCCCEEECCCCCCCCEECCCHHHHHHHHCCCCC---CCCCHHH------HCCCCEEEEEHHHHHHHH----
T ss_conf 466675211468625368888523011400099898458711---5653122------203885886145432379----
Q ss_pred HHHHHHHHCCCCCCCCEEEEEC-CCCCCCCCEEEEEECCCC--CCCHHHCCCEE-EEEECC-CCHHHHHHHHHHHHH---
Q ss_conf 1556655406001681332010-352364427999934865--54413117247-998258-786899989998608---
Q gi|254780270|r 453 PSAALLEVLDPAQNSSFVDHYL-EVEYDLSDVMFIMTANTL--NIPLPLMDRME-IIRIAG-YTEEEKLQIAKNHLV--- 524 (820)
Q Consensus 453 p~~allevldp~qn~~f~d~y~-~~~~dls~v~fi~tan~~--~i~~~l~drme-~i~~~~-y~~~ek~~i~~~~l~--- 524 (820)
T Consensus 155 ~v~~LLda~a~G~~~VEReG~S~~~P---a~F~liaT~NPeEgeLrp~llDRF~l~v~v~~~~~~e~R~eiv~~r~~f~~ 231 (347)
T CHL00081 155 LVDILLDSAASGWNTVEREGISIRHP---ARFVLIGSGNPEEGELRPQLLDRFGMHAEIRTVKDPELRVKIVEQRSNFDK 231 (347)
T ss_pred HHHHHHHHHHCCEEEECCCCEEECCC---CCEEEEECCCCCCCCCCHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHH
T ss_conf 99999999855808980464233057---500688557865567488888263226745887898999999999997651
Q ss_pred ----------------HHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCH
Q ss_conf ----------------9899862578131322899999997317741023478887999989876542117852012796
Q gi|254780270|r 525 ----------------KKVLTEHALKQEECCISDGVLLDIIRLFTHEAGVRSFERALMKIARKAVTKIVKNSDTTVSINE 588 (820)
Q Consensus 525 ----------------p~~~~~~~~~~~~~~~~~~~i~~ii~~Yt~EaGvR~l~r~i~~i~r~~~~~~~~~~~~~~~i~~ 588 (820)
T Consensus 232 ~p~~f~~~~~~~~~~l~~~I~~Ar~~L~~V~v~~~~~~~i~~~~-~~~~v~g~RA~I~l~raARA~AAL~GR~---~V~~ 307 (347)
T CHL00081 232 NPENFREKYSESQDALKTQIILARQLLPNVEIDYDLRVKISQIC-SELDVDGLRGDIVTNRAAKALAAFNGRD---EVTP 307 (347)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH-HHHCCCCCCHHHHHHHHHHHHHHHCCCC---CCCH
T ss_conf 96999999887899999999999864477355999999999999-9848998718999999999999986998---3689
Q ss_pred HHHHHHH
Q ss_conf 7867530
Q gi|254780270|r 589 NNLQDYL 595 (820)
Q Consensus 589 ~~l~~~l 595 (820)
T Consensus 308 eDv~~aa 314 (347)
T CHL00081 308 GDIEKVI 314 (347)
T ss_pred HHHHHHH
T ss_conf 9999999