HHsearch alignment for GI: 254780270 and conserved domain: COG0593
>COG0593 DnaA ATPase involved in DNA replication initiation [DNA replication, recombination, and repair].
Probab=98.05 E-value=5.3e-05 Score=56.70 Aligned_cols=177 Identities=21% Similarity=0.274 Sum_probs=104.2
Q ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECHHH
Q ss_conf 67359986056565027999999770882499861888888883563200145671289999983278873999933155
Q gi|254780270|r 365 KGLILCFVGPPGVGKTSLAQSIAKATGRQYVRMSLGGVYDEADIRGHRRTYIGSMPGRIIQSLKRAKRSNPLLLLDEIDK 444 (820)
Q Consensus 365 ~g~il~l~gppgvGKts~~~sia~al~r~f~~islgg~~d~~~i~gh~~ty~ga~pg~ii~~l~~~~~~npv~~ldeidk 444 (820)
T Consensus 112 ~~nplfi~G~~GlGKTHLl~Aign~~~~~~~~a~v~y~~se~f~~----~~v~a~~~~~~~~Fk~~y-~~dlllIDDiq~ 186 (408)
T COG0593 112 AYNPLFIYGGVGLGKTHLLQAIGNEALANGPNARVVYLTSEDFTN----DFVKALRDNEMEKFKEKY-SLDLLLIDDIQF 186 (408)
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCHHHHHH----HHHHHHHHHHHHHHHHHH-CCCEEEECHHHH
T ss_conf 689579987999978999999999998629986488504899899----999998850488888764-267355513867
Q ss_pred HHHHCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCCCEEEEEECCC----CC-CCHHHCCCEE---EEEECCCCHHHHH
Q ss_conf 42311771155665540600168133201035236442799993486----55-4413117247---9982587868999
Q gi|254780270|r 445 MGSDLRGDPSAALLEVLDPAQNSSFVDHYLEVEYDLSDVMFIMTANT----LN-IPLPLMDRME---IIRIAGYTEEEKL 516 (820)
Q Consensus 445 ~~~~~~gdp~~allevldp~qn~~f~d~y~~~~~dls~v~fi~tan~----~~-i~~~l~drme---~i~~~~y~~~ek~ 516 (820)
T Consensus 187 l~gk~~~--qeefFh~-------------FN~l~~~~k-qIvltsdr~P~~l~~~~~rL~SR~~~Gl~~~I~~Pd~e~r~ 250 (408)
T COG0593 187 LAGKERT--QEEFFHT-------------FNALLENGK-QIVLTSDRPPKELNGLEDRLRSRLEWGLVVEIEPPDDETRL 250 (408)
T ss_pred HCCCHHH--HHHHHHH-------------HHHHHHCCC-EEEEECCCCCHHHCCCCHHHHHHHHCEEEEEECCCCHHHHH
T ss_conf 5677157--9999999-------------998885088-79997078832211035889989863057752798889999
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 8999860898998625781313228999999973177410234788879999898765
Q gi|254780270|r 517 QIAKNHLVKKVLTEHALKQEECCISDGVLLDIIRLFTHEAGVRSFERALMKIARKAVT 574 (820)
Q Consensus 517 ~i~~~~l~p~~~~~~~~~~~~~~~~~~~i~~ii~~Yt~EaGvR~l~r~i~~i~r~~~~ 574 (820)
T Consensus 251 aiL~k-----k-----a~~~~~~i~~ev~~~la~~~~~n--vReLegaL~~l~~~a~~ 296 (408)
T COG0593 251 AILRK-----K-----AEDRGIEIPDEVLEFLAKRLDRN--VRELEGALNRLDAFALF 296 (408)
T ss_pred HHHHH-----H-----HHHCCCCCCHHHHHHHHHHHHCC--HHHHHHHHHHHHHHHHH
T ss_conf 99999-----9-----98658888879999999970030--99999999999999985