HHsearch alignment for GI: 254780270 and conserved domain: COG1239

>COG1239 ChlI Mg-chelatase subunit ChlI [Coenzyme metabolism].
Probab=98.67  E-value=5.2e-07  Score=71.93  Aligned_cols=227  Identities=19%  Similarity=0.299  Sum_probs=141.1

Q ss_pred             HHCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCC----------------------------
Q ss_conf             2011689999999999998424446735998605656502799999977088----------------------------
Q gi|254780270|r  341 HFGLEKVKERIIEYLAVQMRVIKNKGLILCFVGPPGVGKTSLAQSIAKATGR----------------------------  392 (820)
Q Consensus       341 hyGl~~vK~rile~lav~~~~~~~~g~il~l~gppgvGKts~~~sia~al~r----------------------------  392 (820)
T Consensus        19 ivGqd~lk~aL~----l~av~P~iggvLI~--G~kGtaKSt~~Rala~LLp~~~~V~gc~f~cdP~~P~~~c~~c~~k~~   92 (423)
T COG1239          19 IVGQDPLKLALG----LNAVDPQIGGALIA--GEKGTAKSTLARALADLLPEIEVVIGCPFNCDPDDPEEMCDECRAKGD   92 (423)
T ss_pred             HCCCHHHHHHHH----HHHCCCCCCEEEEE--CCCCCCHHHHHHHHHHHCCCCCEECCCCCCCCCCCHHHHHHHHHHHCC
T ss_conf             437537778876----53026310426876--688752779999999867963321688788998870555199986202


Q ss_pred             ------------CEEEEECCCCCC--------HHHHCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECHHHHHHHCCCC
Q ss_conf             ------------249986188888--------888356320014567128999998327887399993315542311771
Q gi|254780270|r  393 ------------QYVRMSLGGVYD--------EADIRGHRRTYIGSMPGRIIQSLKRAKRSNPLLLLDEIDKMGSDLRGD  452 (820)
Q Consensus       393 ------------~f~~islgg~~d--------~~~i~gh~~ty~ga~pg~ii~~l~~~~~~npv~~ldeidk~~~~~~gd  452 (820)
T Consensus        93 e~~~~~~~~r~v~~v~lPl~ateDrvvGslDi~ka~~~g~~af---~PGlLa~A------nRGIlYvDEvnlL~d~l---  160 (423)
T COG1239          93 ELEWLPREKRKVPFVALPLGATEDRLVGSLDIEKALEEGPKAF---QPGLLARA------NRGILYVDEVNLLDDHL---  160 (423)
T ss_pred             CCCCCCCCCEECCEECCCCCCCHHHHCCCCCHHHHHHCCCCCC---CCCCHHHC------CCCEEEEECCCCCCHHH---
T ss_conf             3244542210031223887630433004567999972683002---77511003------58879872334351899---


Q ss_pred             HHHHHHHHCCCCCCCCEEEEEC-CCCCCCCCEEEEEECCCC--CCCHHHCCC-EEEEEECCC-CHHHHHHHHHHHHH---
Q ss_conf             1556655406001681332010-352364427999934865--544131172-479982587-86899989998608---
Q gi|254780270|r  453 PSAALLEVLDPAQNSSFVDHYL-EVEYDLSDVMFIMTANTL--NIPLPLMDR-MEIIRIAGY-TEEEKLQIAKNHLV---  524 (820)
Q Consensus       453 p~~allevldp~qn~~f~d~y~-~~~~dls~v~fi~tan~~--~i~~~l~dr-me~i~~~~y-~~~ek~~i~~~~l~---  524 (820)
T Consensus       161 -vd~LLd~aaeG~n~vereGisi~hp---a~fvligTmNPEeGeLrpqLlDRfg~~v~~~~~~~~~~rv~Ii~r~~~f~~  236 (423)
T COG1239         161 -VDALLDVAAEGVNDVEREGISIRHP---ARFLLIGTMNPEEGELRPQLLDRFGLEVDTHYPLDLEERVEIIRRRLAFEA  236 (423)
T ss_pred             -HHHHHHHHHHCCCEEEECCEEECCC---CCEEEEEECCCCCCCCCHHHHHHHCCEEECCCCCCHHHHHHHHHHHHHHHC
T ss_conf             -9999999971774033575031367---617999644854466324667541115623478878888999999887500


Q ss_pred             -H----------------HHHH-HHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECC
Q ss_conf             -9----------------8998-625781313228999999973177410234788879999898765421178520127
Q gi|254780270|r  525 -K----------------KVLT-EHALKQEECCISDGVLLDIIRLFTHEAGVRSFERALMKIARKAVTKIVKNSDTTVSI  586 (820)
Q Consensus       525 -p----------------~~~~-~~~~~~~~~~~~~~~i~~ii~~Yt~EaGvR~l~r~i~~i~r~~~~~~~~~~~~~~~i  586 (820)
T Consensus       237 ~Pe~f~~~~~~~~~~lR~~ii~ar~~l--~~V~l~~~~~~~ia-~~~~~~~v~g~radi~-~~r-~a~a~aa~-~Gr~~v  310 (423)
T COG1239         237 VPEAFLEKYADAQRALRARIIAARSLL--SEVELDDDAETKIA-ELCARLAVDGHRADIV-VVR-AAKALAAL-RGRTEV  310 (423)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHCC--CCCCCCHHHHHHHH-HHHHHHCCCCCCHHHH-HHH-HHHHHHHH-CCCEEE
T ss_conf             829999999999999999999998446--66467677999999-9999856578742567-899-99999875-396045


Q ss_pred             CHHHHHHHH
Q ss_conf             967867530
Q gi|254780270|r  587 NENNLQDYL  595 (820)
Q Consensus       587 ~~~~l~~~l  595 (820)
T Consensus       311 ~~~Di~~a~  319 (423)
T COG1239         311 EEEDIREAA  319 (423)
T ss_pred             EHHHHHHHH
T ss_conf             201377777