HHsearch alignment for GI: 254780270 and conserved domain: COG1241
>COG1241 MCM2 Predicted ATPase involved in replication control, Cdc46/Mcm family [DNA replication, recombination, and repair].
Probab=98.59 E-value=2.2e-07 Score=74.78 Aligned_cols=197 Identities=24% Similarity=0.362 Sum_probs=111.5
Q ss_pred HHHHHHCHHHHHHHHHHHH--HHHHHCCC---CCCCE-EEEECCCCCCHHHHHHHHHHHHCCCEEEE----ECCC-----
Q ss_conf 7665201168999999999--99984244---46735-99860565650279999997708824998----6188-----
Q gi|254780270|r 337 LDQDHFGLEKVKERIIEYL--AVQMRVIK---NKGLI-LCFVGPPGVGKTSLAQSIAKATGRQYVRM----SLGG----- 401 (820)
Q Consensus 337 Ld~~hyGl~~vK~rile~l--av~~~~~~---~~g~i-l~l~gppgvGKts~~~sia~al~r~f~~i----slgg----- 401 (820)
T Consensus 284 iaPsIyG~e~VKkAilLqLfgGv~k~~~~g~~iRGDInILLvGDPgtaKSqlLk~v~~~aPr~vytsgkgss~~GLTAav 363 (682)
T COG1241 284 IAPSIYGHEDVKKAILLQLFGGVKKNLPDGTRIRGDIHILLVGDPGTAKSQLLKYVAKLAPRGVYTSGKGSSAAGLTAAV 363 (682)
T ss_pred HCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCEEEE
T ss_conf 41510381999999999960897664799862024226998179825199999998864884079726412545730699
Q ss_pred CCCHHHHCCCCCC-CCCCCCHHHHHHHHHCCCCCEEEEEECHHHHHHHCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCC
Q ss_conf 8888883563200-145671289999983278873999933155423117711556655406001681332010352364
Q gi|254780270|r 402 VYDEADIRGHRRT-YIGSMPGRIIQSLKRAKRSNPLLLLDEIDKMGSDLRGDPSAALLEVLDPAQNSSFVDHYLEVEYDL 480 (820)
Q Consensus 402 ~~d~~~i~gh~~t-y~ga~pg~ii~~l~~~~~~npv~~ldeidk~~~~~~gdp~~allevldp~qn~~f~d~y~~~~~dl 480 (820)
T Consensus 364 ~rd~~--tg-e~~LeaGAL----------VlAD~Gv~cIDEfdKm~~~dr----~aihEaME--QQt-IsIaKAGI~atL 423 (682)
T COG1241 364 VRDKV--TG-EWVLEAGAL----------VLADGGVCCIDEFDKMNEEDR----VAIHEAME--QQT-ISIAKAGITATL 423 (682)
T ss_pred EECCC--CC-EEEEECCEE----------EEECCCEEEEEECCCCCHHHH----HHHHHHHH--HCE-EEECCCCEEEEC
T ss_conf 97067--76-078867779----------992497799970567776789----99999987--527-512055425411
Q ss_pred -CCEEEEEECCC--------------CCCCHHHCCCEEEEEECCCCHHHH--HHHH----HHHHH---------------
Q ss_conf -42799993486--------------554413117247998258786899--9899----98608---------------
Q gi|254780270|r 481 -SDVMFIMTANT--------------LNIPLPLMDRMEIIRIAGYTEEEK--LQIA----KNHLV--------------- 524 (820)
Q Consensus 481 -s~v~fi~tan~--------------~~i~~~l~drme~i~~~~y~~~ek--~~i~----~~~l~--------------- 524 (820)
T Consensus 424 nARcsvLAAaNP~~Gryd~~~~~~enI~l~~~lLSRFDLifvl~D~~d~~~D~~ia~hil~~h~~~~~~~~~~~~~~~~~ 503 (682)
T COG1241 424 NARCSVLAAANPKFGRYDPKKTVAENINLPAPLLSRFDLIFVLKDDPDEEKDEEIAEHILDKHRGEEPEETISLDGVDEV 503 (682)
T ss_pred CHHHHHHHHHCCCCCCCCCCCCHHHHCCCCHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
T ss_conf 14444566518877767999997885589835775177547705788853359999999998634565322333322222
Q ss_pred ----HHHHHHHCC-CC--CCCCCCHHHHHHHHHCCC
Q ss_conf ----989986257-81--313228999999973177
Q gi|254780270|r 525 ----KKVLTEHAL-KQ--EECCISDGVLLDIIRLFT 553 (820)
Q Consensus 525 ----p~~~~~~~~-~~--~~~~~~~~~i~~ii~~Yt 553 (820)
T Consensus 504 ~~~~~~~lrkYI~YAR~~v~P~lt~ea~e~l~~~Yv 539 (682)
T COG1241 504 EERDFELLRKYISYARKNVTPVLTEEAREELEDYYV 539 (682)
T ss_pred CCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
T ss_conf 346589999999987505896128999999999998