HHsearch alignment for GI: 254780270 and conserved domain: COG1373
>COG1373 Predicted ATPase (AAA+ superfamily) [General function prediction only].
Probab=97.44 E-value=0.0065 Score=40.89 Aligned_cols=138 Identities=21% Similarity=0.248 Sum_probs=82.3
Q ss_pred CCC-EEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHCCC-CCEEEEEECH
Q ss_conf 673-59986056565027999999770882499861888888883563200145671289999983278-8739999331
Q gi|254780270|r 365 KGL-ILCFVGPPGVGKTSLAQSIAKATGRQYVRMSLGGVYDEADIRGHRRTYIGSMPGRIIQSLKRAKR-SNPLLLLDEI 442 (820)
Q Consensus 365 ~g~-il~l~gppgvGKts~~~sia~al~r~f~~islgg~~d~~~i~gh~~ty~ga~pg~ii~~l~~~~~-~npv~~ldei 442 (820)
T Consensus 35 ~~~~i~~i~GpR~~GKTtllk~l~~~~~~~~iy~~~------~d~~~~~~~l-----~d~~~~~~~~~~~~~~yifLDEI 103 (398)
T COG1373 35 LRPFIILILGPRQVGKTTLLKLLIKGLLEEIIYINF------DDLRLDRIEL-----LDLLRAYIELKEREKSYIFLDEI 103 (398)
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEC------CCCCCCHHHH-----HHHHHHHHHHHCCCCCEEEEEEE
T ss_conf 578549998886477899999999747773599973------6200013567-----78999999852225745999833
Q ss_pred HHHHHHCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCCCEEEEEECCCC----CCCHHHCCCEEEEEECCCCHHHHHHH
Q ss_conf 55423117711556655406001681332010352364427999934865----54413117247998258786899989
Q gi|254780270|r 443 DKMGSDLRGDPSAALLEVLDPAQNSSFVDHYLEVEYDLSDVMFIMTANTL----NIPLPLMDRMEIIRIAGYTEEEKLQI 518 (820)
Q Consensus 443 dk~~~~~~gdp~~allevldp~qn~~f~d~y~~~~~dls~v~fi~tan~~----~i~~~l~drme~i~~~~y~~~ek~~i 518 (820)
T Consensus 104 q~v~~W~~-----~lk-------------~l~d~~~~---~v~itgsss~ll~~~~s~~L~GR~~~~~l~PlSF~Efl~~ 162 (398)
T COG1373 104 QNVPDWER-----ALK-------------YLYDRGNL---DVLITGSSSSLLSKEISESLAGRGKDLELYPLSFREFLKL 162 (398)
T ss_pred CCCHHHHH-----HHH-------------HHHCCCCC---EEEEECCCHHHHCCCHHHHCCCCEEEEEECCCCHHHHHHH
T ss_conf 37610899-----999-------------99756775---0999837167541330232499823789848888998641
Q ss_pred HH--------HHHHHHHHHHHCCC
Q ss_conf 99--------86089899862578
Q gi|254780270|r 519 AK--------NHLVKKVLTEHALK 534 (820)
Q Consensus 519 ~~--------~~l~p~~~~~~~~~ 534 (820)
T Consensus 163 ~~~~~~~~~~~~~f~~Yl~~GGfP 186 (398)
T COG1373 163 KGEEIEPSKLELLFEKYLETGGFP 186 (398)
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCC
T ss_conf 352100256799999987728985