HHsearch alignment for GI: 254780270 and conserved domain: COG4088
>COG4088 Predicted nucleotide kinase [Nucleotide transport and metabolism].
Probab=95.77 E-value=0.008 Score=40.20 Aligned_cols=141 Identities=21% Similarity=0.317 Sum_probs=71.3
Q ss_pred CEEEEECCCCCCHHHHHHHHHHHHCCCEEE-EECCC------CCCHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEE
Q ss_conf 359986056565027999999770882499-86188------88888835632001456712899999832788739999
Q gi|254780270|r 367 LILCFVGPPGVGKTSLAQSIAKATGRQYVR-MSLGG------VYDEADIRGHRRTYIGSMPGRIIQSLKRAKRSNPLLLL 439 (820)
Q Consensus 367 ~il~l~gppgvGKts~~~sia~al~r~f~~-islgg------~~d~~~i~gh~~ty~ga~pg~ii~~l~~~~~~npv~~l 439 (820)
T Consensus 2 pLiIlTGyPgsGKTtfakeLak~L~~~i~~vi~l~kdy~~~i~~DEslpi~k-e~yres~~ks~~r-lldSalkn~~VIv 79 (261)
T COG4088 2 PLIILTGYPGSGKTTFAKELAKELRQEIWRVIHLEKDYLRGILWDESLPILK-EVYRESFLKSVER-LLDSALKNYLVIV 79 (261)
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHEECCCCCCHHH-HHHHHHHHHHHHH-HHHHHHCCEEEEE
T ss_conf 5699826999880178999999999720011213201454123313240379-9999999888999-9999863649997
Q ss_pred ECHHHHHHHCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCHHHCCCEEEEEECCCCHHHHHHHH
Q ss_conf 33155423117711556655406001681332010352364427999934865544131172479982587868999899
Q gi|254780270|r 440 DEIDKMGSDLRGDPSAALLEVLDPAQNSSFVDHYLEVEYDLSDVMFIMTANTLNIPLPLMDRMEIIRIAGYTEEEKLQIA 519 (820)
Q Consensus 440 deidk~~~~~~gdp~~allevldp~qn~~f~d~y~~~~~dls~v~fi~tan~~~i~~~l~drme~i~~~~y~~~ek~~i~ 519 (820)
T Consensus 80 DdtNYy-ksmRrq-----L~ceak~~~tt~ciIyl~~plDt--------------------------------------- 114 (261)
T COG4088 80 DDTNYY-KSMRRQ-----LACEAKERKTTWCIIYLRTPLDT--------------------------------------- 114 (261)
T ss_pred ECCCHH-HHHHHH-----HHHHHHHCCCCEEEEEECCCHHH---------------------------------------
T ss_conf 063288-899999-----99999863786599997268899---------------------------------------
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHH
Q ss_conf 98608989986257813132289999999731774102347888
Q gi|254780270|r 520 KNHLVKKVLTEHALKQEECCISDGVLLDIIRLFTHEAGVRSFER 563 (820)
Q Consensus 520 ~~~l~p~~~~~~~~~~~~~~~~~~~i~~ii~~Yt~EaGvR~l~r 563 (820)
T Consensus 115 -------c~rrN-~er-gepip~Evl~qly~RfEePn~~~rWDs 149 (261)
T COG4088 115 -------CLRRN-RER-GEPIPEEVLRQLYDRFEEPNPDRRWDS 149 (261)
T ss_pred -------HHHHH-CCC-CCCCCHHHHHHHHHHHCCCCCCCCCCC
T ss_conf -------98860-247-999989999999996149997765567