HHsearch alignment for GI: 254780270 and conserved domain: COG4930
>COG4930 Predicted ATP-dependent Lon-type protease [Posttranslational modification, protein turnover, chaperones].
Probab=99.23 E-value=1.4e-10 Score=98.95 Aligned_cols=196 Identities=25% Similarity=0.416 Sum_probs=151.7
Q ss_pred CCHHHHHHHH-CCCCC-CCCCHH-CCCCCCCCCEEEECCCC-CEEEEEEEEEECCCCCEEECCCH-HHHHHHHHHHHHHH
Q ss_conf 7967867530-52000-332000-22336500000000016-80799999997489972443256-89999999999999
Q gi|254780270|r 586 INENNLQDYL-GVPRY-KYGKIE-GEDQVGIVTGLAWTEVG-GEILTVEGVIMPGKGEITITGNL-KEIMKESILAASSY 660 (820)
Q Consensus 586 i~~~~l~~~l-g~~~~-~~~~~~-~~~~~G~v~GLa~t~~G-G~~l~IE~~~~~g~g~l~lTG~l-g~vmkES~~~A~s~ 660 (820)
T Consensus 475 idne~l~e~fvsvpe~gg~~lipag~~kpg~~~~v~~~~~g~~glyrfe~q~~ag~gk~~~sg~gs~t~~keair~~f~y 554 (683)
T COG4930 475 IDNETLEEFFVSVPEQGGSELIPAGMPKPGVVHLVTQAESGMTGLYRFETQMTAGNGKHSVSGLGSSTSAKEAIRVGFDY 554 (683)
T ss_pred ECCCCHHHHHEECCCCCCCEECCCCCCCCCEEEEEEECCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 41621787836173358862067899998638887410357413588888985058733346678772078899988888
Q ss_pred HHHHHHHCCCCHHHHHHCCCEEECCCCCCCCCCCCHHHHH--HHHHHHHHHCCCCCCCCEEEEEEEECCEEEEECCHHHH
Q ss_conf 9998886299855742078147448888478887306899--99999998368887561066368503025000656899
Q gi|254780270|r 661 VRSKATTFGIIPSAFNEINIHVHVPEGATPKDGPSAGIAM--ATAIVSIMTCIPVYKNVAMTGELTLRGRVLPIGGLKEK 738 (820)
Q Consensus 661 ~k~~~~~~~~~~~~~~~~diHih~p~Ga~pKDGPSAGi~i--~tal~S~~~~~~v~~~iAmTGEitl~G~VlpiGGi~eK 738 (820)
T Consensus 555 fk~n~~~vs~t~-~~~e~~y~lhv~~l~--~~g~s~~~sl~a~ialcs~~l~k~~qeq~~vlgsmtlgg~i~~~~~la~~ 631 (683)
T COG4930 555 FKGNLSRVSATA-KFSEHEYHLHVVELH--NTGPSTATSLAALIALCSVLLAKPVQEQMVVLGSMTLGGVINPVQDLAAS 631 (683)
T ss_pred HHCCHHHHHCEE-EECCCEEEEEEEEEC--CCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHEEEECCCCCCHHHHHHHH
T ss_conf 503155400015-203210267765300--67840466699999998998602077656331001305404168888999
Q ss_pred HHHHHHCCCCEEECCHHHHHHHHHCCHHHHCCCEEEECC-CHHHHHH
Q ss_conf 999997099699803677550776148877097999819-3999888
Q gi|254780270|r 739 LLAALRAGVTKVLIPEENIKDLMDIPENVKNGLEIIPVS-FMGEVLK 784 (820)
Q Consensus 739 ~laA~raGi~~viiP~~N~~d~~~ip~~~~~~l~~~~v~-~~~evl~ 784 (820)
T Consensus 632 lq~~~dsgakkv~lp~ssa~~i~tvp~~lftkfqvsfy~~pvdavyk 678 (683)
T COG4930 632 LQLAFDSGAKKVLLPMSSAVDIPTVPAELFTKFQVSFYSEPVDAVYK 678 (683)
T ss_pred HHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHEEEEECCCHHHHHH
T ss_conf 99988458755887633457767789799624146433482889998