HHsearch alignment for GI: 254780270 and conserved domain: KOG0478
>KOG0478 consensus.
Probab=98.71 E-value=2.2e-07 Score=74.69 Aligned_cols=244 Identities=20% Similarity=0.262 Sum_probs=133.0
Q ss_pred HHHHHHCHHHHHHHHHHHHHHHHHCCCC-----CCCE-EEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHCC
Q ss_conf 7665201168999999999999842444-----6735-998605656502799999977088249986188888888356
Q gi|254780270|r 337 LDQDHFGLEKVKERIIEYLAVQMRVIKN-----KGLI-LCFVGPPGVGKTSLAQSIAKATGRQYVRMSLGGVYDEADIRG 410 (820)
Q Consensus 337 Ld~~hyGl~~vK~rile~lav~~~~~~~-----~g~i-l~l~gppgvGKts~~~sia~al~r~f~~islgg~~d~~~i~g 410 (820)
T Consensus 427 iAPsIye~edvKkglLLqLfGGt~k~~~~~~~~R~~INILL~GDPGtsKSqlLqyv~~l~pRg~yTSGkGsSav-G-L-- 502 (804)
T KOG0478 427 IAPSIYELEDVKKGLLLQLFGGTRKEDEKSGRFRGDINILLVGDPGTSKSQLLQYCHRLLPRGVYTSGKGSSAV-G-L-- 502 (804)
T ss_pred HCHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEECCCCCCHH-C-C--
T ss_conf 06565344226666778875687632233444245522899469986789999999974775404058763022-0-0--
Q ss_pred CCCCCCCC--CCHHHHH-HHHHCCCCCEEEEEECHHHHHHHCCCCHHHHHHHHCCCCCCCCEEEEEC-CCCCCCCCEEEE
Q ss_conf 32001456--7128999-9983278873999933155423117711556655406001681332010-352364427999
Q gi|254780270|r 411 HRRTYIGS--MPGRIIQ-SLKRAKRSNPLLLLDEIDKMGSDLRGDPSAALLEVLDPAQNSSFVDHYL-EVEYDLSDVMFI 486 (820)
Q Consensus 411 h~~ty~ga--~pg~ii~-~l~~~~~~npv~~ldeidk~~~~~~gdp~~allevldp~qn~~f~d~y~-~~~~dls~v~fi 486 (820)
T Consensus 503 --TayVtrd~dtkqlVLesGALVLSD~GiCCIDEFDKM~dStr----SvLhEvMEQQTvSIAKAGII~sLN---AR~SVL 573 (804)
T KOG0478 503 --TAYVTKDPDTRQLVLESGALVLSDNGICCIDEFDKMSDSTR----SVLHEVMEQQTLSIAKAGIIASLN---ARCSVL 573 (804)
T ss_pred --EEEEEECCCCCEEEEECCCEEECCCCEEECHHHHHHHHHHH----HHHHHHHHHHHHHHHHCCEEEECC---CCCEEE
T ss_conf --35677657655466504848972896577112333327788----999999987631174302234216---653034
Q ss_pred EECC--------------CCCCCHHHCCCEEEEEECCCCHHHH--H----HHHHHHH--------------HHHHHHHHC
Q ss_conf 9348--------------6554413117247998258786899--9----8999860--------------898998625
Q gi|254780270|r 487 MTAN--------------TLNIPLPLMDRMEIIRIAGYTEEEK--L----QIAKNHL--------------VKKVLTEHA 532 (820)
Q Consensus 487 ~tan--------------~~~i~~~l~drme~i~~~~y~~~ek--~----~i~~~~l--------------~p~~~~~~~ 532 (820)
T Consensus 574 AaANP~~skynp~k~i~eNI~LpptLLSRFDLIylllD~~DE~~Dr~La~HivsLy~e~~~~~~~~~~d~~~lr~yi~yA 653 (804)
T KOG0478 574 AAANPIRSKYNPNKSIIENINLPPTLLSRFDLIFLLLDKPDERSDRRLADHIVALYPETGEKQGSEAIDMNLLRDYIRYA 653 (804)
T ss_pred EEECCCCCCCCCCCCHHHCCCCCHHHHHHHCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 45354324579997623216788056432337899842753267789999999841455521025778689999999997
Q ss_pred CCCCCCCCCHHHHHHHHHCCC--C----CCH-HHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHH
Q ss_conf 781313228999999973177--4----102-34788879999898765421178520127967867530
Q gi|254780270|r 533 LKQEECCISDGVLLDIIRLFT--H----EAG-VRSFERALMKIARKAVTKIVKNSDTTVSINENNLQDYL 595 (820)
Q Consensus 533 ~~~~~~~~~~~~i~~ii~~Yt--~----EaG-vR~l~r~i~~i~r~~~~~~~~~~~~~~~i~~~~l~~~l 595 (820)
T Consensus 654 rk~i~p~l~~ea~~~l~~ayvd~rk~~~~~~~itat~rQlesLiRlsEahak--~r~s~~ve~~dV~eA~ 721 (804)
T KOG0478 654 RKNIHPALSPEASQALIQAYVDMRKIGEGAGQITATPRQLESLIRLSEAHAK--MRLSNRVEEIDVEEAV 721 (804)
T ss_pred HCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH--HHCCCCCCHHHHHHHH
T ss_conf 4257865568999999998665665313456530148889999999998887--6402555445599999