HHsearch alignment for GI: 254780270 and conserved domain: KOG0480
>KOG0480 consensus.
Probab=97.39 E-value=0.0035 Score=42.93 Aligned_cols=157 Identities=28% Similarity=0.419 Sum_probs=92.1
Q ss_pred HHHHHHHCHHHHHHHHHHHH--HHHHHCC---CCCCCE-EEEECCCCCCHHHHHHHHHHHHCCCEEEE----ECCC----
Q ss_conf 77665201168999999999--9998424---446735-99860565650279999997708824998----6188----
Q gi|254780270|r 336 ILDQDHFGLEKVKERIIEYL--AVQMRVI---KNKGLI-LCFVGPPGVGKTSLAQSIAKATGRQYVRM----SLGG---- 401 (820)
Q Consensus 336 iLd~~hyGl~~vK~rile~l--av~~~~~---~~~g~i-l~l~gppgvGKts~~~sia~al~r~f~~i----slgg---- 401 (820)
T Consensus 342 Sl~PsIyGhe~VK~GilL~LfGGv~K~a~eg~~lRGDinv~iVGDPgt~KSQfLk~v~~fsPR~vYtsGkaSSaAGLTaa 421 (764)
T KOG0480 342 SLFPSIYGHELVKAGILLSLFGGVHKSAGEGTSLRGDINVCIVGDPGTGKSQFLKAVCAFSPRSVYTSGKASSAAGLTAA 421 (764)
T ss_pred HHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCEEECCCCCCCCCCEEE
T ss_conf 63762015389986689998478543578986546773189957997138899999865487315850763443464689
Q ss_pred -CCCHHHHCCCCCCC-CCCCCHHHHHHHHHCCCCCEEEEEECHHHHHHHCCCCHHHHHHHHCCCCCCCCEEEEECCCCCC
Q ss_conf -88888835632001-4567128999998327887399993315542311771155665540600168133201035236
Q gi|254780270|r 402 -VYDEADIRGHRRTY-IGSMPGRIIQSLKRAKRSNPLLLLDEIDKMGSDLRGDPSAALLEVLDPAQNSSFVDHYLEVEYD 479 (820)
Q Consensus 402 -~~d~~~i~gh~~ty-~ga~pg~ii~~l~~~~~~npv~~ldeidk~~~~~~gdp~~allevldp~qn~~f~d~y~~~~~d 479 (820)
T Consensus 422 VvkD~e---sgdf~iEAGAL--------m--LADnGICCIDEFDKMd~~d----qvAihEAME--QQ----------tIS 472 (764)
T KOG0480 422 VVKDEE---SGDFTIEAGAL--------M--LADNGICCIDEFDKMDVKD----QVAIHEAME--QQ----------TIS 472 (764)
T ss_pred EEECCC---CCCEEEECCCE--------E--ECCCCEEEECHHCCCCHHH----HHHHHHHHH--HH----------EEH
T ss_conf 976377---77335534737--------8--8169668831000357076----899999987--51----------000
Q ss_pred CCCEEEEEE----------CC--------------CCCCCHHHCCCEEEEE--ECCCCHHHHHHHHHH
Q ss_conf 442799993----------48--------------6554413117247998--258786899989998
Q gi|254780270|r 480 LSDVMFIMT----------AN--------------TLNIPLPLMDRMEIIR--IAGYTEEEKLQIAKN 521 (820)
Q Consensus 480 ls~v~fi~t----------an--------------~~~i~~~l~drme~i~--~~~y~~~ek~~i~~~ 521 (820)
T Consensus 473 IaKAGv~aTLnARtSIlAAANPv~GhYdR~ktl~eNi~msApimSRFDL~FiLlD~~nE~~D~~ia~h 540 (764)
T KOG0480 473 IAKAGVVATLNARTSILAAANPVGGHYDRKKTLRENINMSAPIMSRFDLFFILLDDCNEVVDYAIARH 540 (764)
T ss_pred HEECCEEEEECCHHHHHHHCCCCCCCCCCCCCHHHHCCCCCHHHHHHCEEEEEECCCCHHHHHHHHHH
T ss_conf 33020688622235555532776774553300665227780454222279999357866777999999