HHsearch alignment for GI: 254780270 and conserved domain: KOG0652
>KOG0652 consensus.
Probab=98.56 E-value=6.6e-07 Score=71.13 Aligned_cols=161 Identities=29% Similarity=0.446 Sum_probs=105.8
Q ss_pred HHHCHHHHHHHHHHHHHHHHHCCC-------C-CCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHCCC
Q ss_conf 520116899999999999984244-------4-67359986056565027999999770882499861888888883563
Q gi|254780270|r 340 DHFGLEKVKERIIEYLAVQMRVIK-------N-KGLILCFVGPPGVGKTSLAQSIAKATGRQYVRMSLGGVYDEADIRGH 411 (820)
Q Consensus 340 ~hyGl~~vK~rile~lav~~~~~~-------~-~g~il~l~gppgvGKts~~~sia~al~r~f~~islgg~~d~~~i~gh 411 (820)
T Consensus 172 DiGGldkQIqELvEAi-VLpmth~ekF~~lgi~pPKGvLmYGPPGTGKTlmARAcAaqT~aTFL--KLAgPQLV------ 242 (424)
T KOG0652 172 DIGGLDKQIQELVEAI-VLPMTHKEKFENLGIRPPKGVLMYGPPGTGKTLMARACAAQTNATFL--KLAGPQLV------ 242 (424)
T ss_pred CCCCHHHHHHHHHHHH-CCCCCCHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCHHH--HHCCHHHH------
T ss_conf 0325789999999886-14565687887468889972276579997577999999874010688--73264777------
Q ss_pred CCCCCCCCCHHHHHHHHHCCCCCE-EEEEECHHHHHHH-----CCCCH--HHHHHHHCCCCCCCCEEEEECCCCCCCCCE
Q ss_conf 200145671289999983278873-9999331554231-----17711--556655406001681332010352364427
Q gi|254780270|r 412 RRTYIGSMPGRIIQSLKRAKRSNP-LLLLDEIDKMGSD-----LRGDP--SAALLEVLDPAQNSSFVDHYLEVEYDLSDV 483 (820)
Q Consensus 412 ~~ty~ga~pg~ii~~l~~~~~~np-v~~ldeidk~~~~-----~~gdp--~~allevldp~qn~~f~d~y~~~~~dls~v 483 (820)
T Consensus 243 -QMfIGdGAkLVRDAFaLAKEkaP~IIFIDElDAIGtKRfDSek~GDREVQRTMLELLN--QLDGFss~--------~~v 311 (424)
T KOG0652 243 -QMFIGDGAKLVRDAFALAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLN--QLDGFSSD--------DRV 311 (424)
T ss_pred -HHHHCCHHHHHHHHHHHHHCCCCEEEEEECHHHHCCCCCCCCCCCCHHHHHHHHHHHH--HCCCCCCC--------CCE
T ss_conf -6653341889999998753349838997300232334365312343899999999998--60489975--------626
Q ss_pred EEEEECCCCCC-CHHH-----CCCEEEEEECCCCHHHHHHHHHHH
Q ss_conf 99993486554-4131-----172479982587868999899986
Q gi|254780270|r 484 MFIMTANTLNI-PLPL-----MDRMEIIRIAGYTEEEKLQIAKNH 522 (820)
Q Consensus 484 ~fi~tan~~~i-~~~l-----~drme~i~~~~y~~~ek~~i~~~~ 522 (820)
T Consensus 312 KviAATNRvDiLDPALlRSGRLDRK--IEfP~Pne~aRarIlQIH 354 (424)
T KOG0652 312 KVIAATNRVDILDPALLRSGRLDRK--IEFPHPNEEARARILQIH 354 (424)
T ss_pred EEEEECCCCCCCCHHHHHCCCCCCC--CCCCCCCHHHHHHHHHHH
T ss_conf 7885216434348888644664444--348899778988999886