HHsearch alignment for GI: 254780270 and conserved domain: KOG0737

Probab=98.95  E-value=6.4e-08  Score=78.79  Aligned_cols=203  Identities=22%  Similarity=0.372  Sum_probs=129.0

Q ss_pred             HHHCHHHHHHHHHHHHHHHHHCCC--------CCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHCCC
Q ss_conf             520116899999999999984244--------467359986056565027999999770882499861888888883563
Q gi|254780270|r  340 DHFGLEKVKERIIEYLAVQMRVIK--------NKGLILCFVGPPGVGKTSLAQSIAKATGRQYVRMSLGGVYDEADIRGH  411 (820)
Q Consensus       340 ~hyGl~~vK~rile~lav~~~~~~--------~~g~il~l~gppgvGKts~~~sia~al~r~f~~islgg~~d~~~i~gh  411 (820)
T Consensus        93 DIggLe~v~~~L~e~VilPlr~pelF~~g~Ll~p~kGiLL~GPpG~GKTmlAKA~Akeaga~fInv~~s~lt~KWf--gE  170 (386)
T KOG0737          93 DIGGLEEVKDALQELVILPLRRPELFAKGKLLRPPKGILLYGPPGTGKTMLAKAIAKEAGANFINVSVSNLTSKWF--GE  170 (386)
T ss_pred             HCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCHHHH--HH
T ss_conf             1335289999999877520124666414531468643051189982188999999987279710001365532667--77


Q ss_pred             CCCCCCCCCHHHHHHHHH--CCCCCEEEEEECHHHHH-HHCCCCH-HHHHHHHCCCCCCCCEEEEECCCCCCCC-CEEEE
Q ss_conf             200145671289999983--27887399993315542-3117711-5566554060016813320103523644-27999
Q gi|254780270|r  412 RRTYIGSMPGRIIQSLKR--AKRSNPLLLLDEIDKMG-SDLRGDP-SAALLEVLDPAQNSSFVDHYLEVEYDLS-DVMFI  486 (820)
Q Consensus       412 ~~ty~ga~pg~ii~~l~~--~~~~npv~~ldeidk~~-~~~~gdp-~~allevldp~qn~~f~d~y~~~~~dls-~v~fi  486 (820)
T Consensus       171 ~e--------Klv~AvFslAsKl~P~iIFIDEvds~L~~R~s~dHEa~a~m-------K~eFM~~WDGl~s~~~~rVlVl  235 (386)
T KOG0737         171 AQ--------KLVKAVFSLASKLQPSIIFIDEVDSFLGQRRSTDHEATAMM-------KNEFMALWDGLSSKDSERVLVL  235 (386)
T ss_pred             HH--------HHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCHHHHHHHH-------HHHHHHHHCCCCCCCCCEEEEE
T ss_conf             88--------89999982065348615656658889864046427999999-------9999998616467887159997


Q ss_pred             EECCCC-CCCHHHCCCEE---EEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHH
Q ss_conf             934865-54413117247---99825878689998999860898998625781313228999999973177410234788
Q gi|254780270|r  487 MTANTL-NIPLPLMDRME---IIRIAGYTEEEKLQIAKNHLVKKVLTEHALKQEECCISDGVLLDIIRLFTHEAGVRSFE  562 (820)
Q Consensus       487 ~tan~~-~i~~~l~drme---~i~~~~y~~~ek~~i~~~~l~p~~~~~~~~~~~~~~~~~~~i~~ii~~Yt~EaGvR~l~  562 (820)
T Consensus       236 gATNRP~DlDeAiiRR~p~rf~V~lP~--~~qR~kILkviLk~e~~e------~--~vD~~~iA~~t~GyS---G-----  297 (386)
T KOG0737         236 GATNRPFDLDEAIIRRLPRRFHVGLPD--AEQRRKILKVILKKEKLE------D--DVDLDEIAQMTEGYS---G-----  297 (386)
T ss_pred             ECCCCCCCHHHHHHHHCCCEEEECCCC--HHHHHHHHHHHHCCCCCC------C--CCCHHHHHHHCCCCC---H-----
T ss_conf             079998437899998476436537984--444999999994243468------7--769888887608986---7-----


Q ss_pred             HHHHHHHHHHHHHHH
Q ss_conf             879999898765421
Q gi|254780270|r  563 RALMKIARKAVTKIV  577 (820)
Q Consensus       563 r~i~~i~r~~~~~~~  577 (820)
T Consensus       298 SDLkelC~~Aa~~~i  312 (386)
T KOG0737         298 SDLKELCRLAALRPI  312 (386)
T ss_pred             HHHHHHHHHHHHHHH
T ss_conf             789999998767689