HHsearch alignment for GI: 254780270 and conserved domain: KOG0739

Probab=98.73  E-value=1.6e-07  Score=75.84  Aligned_cols=154  Identities=25%  Similarity=0.363  Sum_probs=91.6

Q ss_pred             HHHCHHHHHHHHHHHHHHH----HHC-CCCC-CCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHCCCCC
Q ss_conf             5201168999999999999----842-4446-735998605656502799999977088249986188888888356320
Q gi|254780270|r  340 DHFGLEKVKERIIEYLAVQ----MRV-IKNK-GLILCFVGPPGVGKTSLAQSIAKATGRQYVRMSLGGVYDEADIRGHRR  413 (820)
Q Consensus       340 ~hyGl~~vK~rile~lav~----~~~-~~~~-g~il~l~gppgvGKts~~~sia~al~r~f~~islgg~~d~~~i~gh~~  413 (820)
T Consensus       134 DVAGLE~AKeALKEAVILPIKFPqlFtGkR~PwrgiLLyGPPGTGKSYLAKAVATEAnSTFFSvSSSDL--vSKWmGES-  210 (439)
T KOG0739         134 DVAGLEGAKEALKEAVILPIKFPQLFTGKRKPWRGILLYGPPGTGKSYLAKAVATEANSTFFSVSSSDL--VSKWMGES-  210 (439)
T ss_pred             HHCCCHHHHHHHHHHEEECCCCHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEHHHH--HHHHHCCH-
T ss_conf             301405689998754350002535415887754257886799975779999987414770687301788--99873217-


Q ss_pred             CCCCCCCHHHHHHHH-HCCCCCE-EEEEECHHHHHHHCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCCCEEEEEECCC
Q ss_conf             014567128999998-3278873-99993315542311771155665540600168133201035236442799993486
Q gi|254780270|r  414 TYIGSMPGRIIQSLK-RAKRSNP-LLLLDEIDKMGSDLRGDPSAALLEVLDPAQNSSFVDHYLEVEYDLSDVMFIMTANT  491 (820)
Q Consensus       414 ty~ga~pg~ii~~l~-~~~~~np-v~~ldeidk~~~~~~gdp~~allevldp~qn~~f~d~y~~~~~dls~v~fi~tan~  491 (820)
T Consensus       211 -------EkLVknLFemARe~kPSIIFiDEiDslcg~r~enEseasRRI-----KTEfLVQMqGVG~d~~gvLVLgATNi  278 (439)
T KOG0739         211 -------EKLVKNLFEMARENKPSIIFIDEIDSLCGSRSENESEASRRI-----KTEFLVQMQGVGNDNDGVLVLGATNI  278 (439)
T ss_pred             -------HHHHHHHHHHHHHCCCCEEEEEHHHHHCCCCCCCCHHHHHHH-----HHHHHHHHHCCCCCCCCEEEEECCCC
T ss_conf             -------999999999987349947986344443268877711777777-----77888764066658886489723788


Q ss_pred             C-CCCHHHCCCEE-EEEEC
Q ss_conf             5-54413117247-99825
Q gi|254780270|r  492 L-NIPLPLMDRME-IIRIA  508 (820)
Q Consensus       492 ~-~i~~~l~drme-~i~~~  508 (820)
T Consensus       279 Pw~LDsAIRRRFekRIYIP  297 (439)
T KOG0739         279 PWVLDSAIRRRFEKRIYIP  297 (439)
T ss_pred             CHHHHHHHHHHHHCCEECC
T ss_conf             4367799998765023010