HHsearch alignment for GI: 254780270 and conserved domain: KOG1051

Probab=96.78  E-value=0.013  Score=38.70  Aligned_cols=143  Identities=20%  Similarity=0.262  Sum_probs=81.2

Q ss_pred             CCCCC-HHHHHHHHHHHHHHHHHHHCCHH--HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHH
Q ss_conf             24788-57888889999999875311025--7899999876540415876632210688998776652011689999999
Q gi|254780270|r  277 KIRLS-KEAREKALSELQKLRQMNPLSAE--SSVVRNYLDWLLGVPWDKKSKTKKNLDFAIRILDQDHFGLEKVKERIIE  353 (820)
Q Consensus       277 ~~~lp-~e~~~~~~kEl~rL~~m~~~s~E--~~v~r~Yld~~~~lPW~~~t~~~~dl~~a~~iLd~~hyGl~~vK~rile  353 (820)
T Consensus       136 Eag~~s~~vK~~ve~~~-g~~~~~~~~~~~~~~~L~~~~~dl~p~~~~-------------gk~dPvigr~deeirRvi~  201 (898)
T KOG1051         136 EAGFSSSAVKSAVEQPV-GQFRSPSRGPLWPLLFLENYGTDLTPRARQ-------------GKLDPVIGRHDEEIRRVIE  201 (898)
T ss_pred             HHCCCHHHHHHHHHHCC-CCCCCCCCCCCCCHHHHHHCCCCCCHHHHC-------------CCCCCCCCCCHHHHHHHHH
T ss_conf             95589589999886302-445777767764346787506456724433-------------6878865885288999999


Q ss_pred             HHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHH----------HCCCEEEEECCCCCCHHHHCCCCCCCCCCCCHHH
Q ss_conf             999998424446735998605656502799999977----------0882499861888888883563200145671289
Q gi|254780270|r  354 YLAVQMRVIKNKGLILCFVGPPGVGKTSLAQSIAKA----------TGRQYVRMSLGGVYDEADIRGHRRTYIGSMPGRI  423 (820)
Q Consensus       354 ~lav~~~~~~~~g~il~l~gppgvGKts~~~sia~a----------l~r~f~~islgg~~d~~~i~gh~~ty~ga~pg~i  423 (820)
T Consensus       202 iL~Rr~k----~NP--vLVG~~gvgktaiv~gla~ri~~G~vp~~l~~~~l~~l~~g~l~aGa-------~~rge~E~rl  268 (898)
T KOG1051         202 ILSRKTK----NNP--VLVGEPGVGKTAIVEGLAQRIATGDVPETLKDKKLIALDFGSLVAGA-------KRRGEFEERL  268 (898)
T ss_pred             HHHCCCC----CCC--EEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHCCCCC-------CCCHHHHHHH
T ss_conf             9814678----996--69836877721689999987661788853345524898700003586-------4212788999


Q ss_pred             HHHHHHCC--CCCEEEEEECHHHHH
Q ss_conf             99998327--887399993315542
Q gi|254780270|r  424 IQSLKRAK--RSNPLLLLDEIDKMG  446 (820)
Q Consensus       424 i~~l~~~~--~~npv~~ldeidk~~  446 (820)
T Consensus       269 k~l~k~v~~~~~gvILfigelh~lv  293 (898)
T KOG1051         269 KELLKEVESGGGGVILFLGELHWLV  293 (898)
T ss_pred             HHHHHHHHCCCCCEEEEECCEEEEE
T ss_conf             9999998547986899832143220