HHsearch alignment for GI: 254780270 and conserved domain: KOG1400
>KOG1400 consensus.
Probab=96.99 E-value=0.0029 Score=43.54 Aligned_cols=106 Identities=20% Similarity=0.244 Sum_probs=66.4
Q ss_pred CCEEEEEEEECCCEECCCEEEEEECCCHHHHHHHHHHHHC--CCEEEEEECCCCCCCCCCHHHEECCCEEEEEEEEEECC
Q ss_conf 7636756631782568871430642948999999999972--98499997368677788865602531489999979988
Q gi|254780270|r 24 DGIIYPLLPLRDIVVFPYMIVPLFVGREKSVRALDEAMNS--HKKIILVTQMNSNDENPIASSVYRIGTIVDIVQILRLP 101 (820)
Q Consensus 24 ~~~~LPIlPLrn~VLFPG~vlPL~V~eprsi~aIe~al~~--d~~I~vV~qkD~~~e~p~~edLy~VGTlakI~qi~klp 101 (820)
T Consensus 62 t~~~~p~~~~~~~v~~PgqtLPl~~i~~~~~s~~r~lvs~ar~~~F~vl~r~~v----~~--re~~r~tt~evd~-~R~p 134 (371)
T KOG1400 62 TTNWIPICGQVMAVLFPGQTLPLKFIDPQERSIVRRLVSSARDNGFVVLFRSDV----PE--RESLRYTTTEVDA-YRVP 134 (371)
T ss_pred CEEEECCCCCEEEEECCCCCCCCHHCCHHHHHHHHHHHHHHCCCCEEEEECCCC----HH--HHHCCCCCEECCC-CCCC
T ss_conf 602631467204686476668600059889999999987611796589850424----67--7634660000035-6560
Q ss_pred -C--CE--EEEEEEEEEEEEEEEE-EECCCEEEEEEEEECC
Q ss_conf -9--80--9999997547999988-7079819999998048
Q gi|254780270|r 102 -D--GT--VKILVEGSVRARIVEY-IEREDFLEAITQVLPD 136 (820)
Q Consensus 102 -D--G~--~~ILVeGl~RvkI~ei-~~~~pyl~A~Ve~l~d 136 (820)
T Consensus 135 ~d~Fgn~l~~~~~~G~y~~~vl~lR~qs~g~~e~~~qL~P~ 175 (371)
T KOG1400 135 QDNFGNALSMVKAMGRYRCKVLKLRTQSLGRGEAEVQLLPD 175 (371)
T ss_pred HHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCEEEECCC
T ss_conf 34441020222642641023244113587766634774465