HHsearch alignment for GI: 254780270 and conserved domain: KOG1514
>KOG1514 consensus.
Probab=98.03 E-value=0.00054 Score=49.09 Aligned_cols=181 Identities=24% Similarity=0.389 Sum_probs=120.5
Q ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHC--------CCEEEEECCCCCCH----------HHHCCCCCCCCCCCCHHHH
Q ss_conf 44673599860565650279999997708--------82499861888888----------8835632001456712899
Q gi|254780270|r 363 KNKGLILCFVGPPGVGKTSLAQSIAKATG--------RQYVRMSLGGVYDE----------ADIRGHRRTYIGSMPGRII 424 (820)
Q Consensus 363 ~~~g~il~l~gppgvGKts~~~sia~al~--------r~f~~islgg~~d~----------~~i~gh~~ty~ga~pg~ii 424 (820)
T Consensus 419 ~~~g~~mYIsGvPGtGKT~tV~~Vm~~Lq~~s~~~e~p~f~yveINgm~l~~~~~~Y~~I~~~lsg~~~~~~~al----- 493 (767)
T KOG1514 419 QGLGSCMYISGVPGTGKTATVLEVMKELQTSSAQKELPKFDYVEINGLRLASPREIYEKIWEALSGERVTWDAAL----- 493 (767)
T ss_pred CCCCEEEEEECCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCEEEECCEEECCHHHHHHHHHHHCCCCCCCHHHHH-----
T ss_conf 777407998469998832129999999998775057898607987144615889999999997555743077889-----
Q ss_pred HHHH------HCCCCCEEEEEECHHHHHHHCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCHHH
Q ss_conf 9998------3278873999933155423117711556655406001681332010352364427999934865544131
Q gi|254780270|r 425 QSLK------RAKRSNPLLLLDEIDKMGSDLRGDPSAALLEVLDPAQNSSFVDHYLEVEYDLSDVMFIMTANTLNIPLPL 498 (820)
Q Consensus 425 ~~l~------~~~~~npv~~ldeidk~~~~~~gdp~~allevldp~qn~~f~d~y~~~~~dls~v~fi~tan~~~i~~~l 498 (820)
T Consensus 494 ~~L~~~f~~~k~~~~~~VvLiDElD~Lvtr~Q----dVlYn~fdW------------pt~~~sKLvvi~IaNTmdlPEr~ 557 (767)
T KOG1514 494 EALNFRFTVPKPKRSTTVVLIDELDILVTRSQ----DVLYNIFDW------------PTLKNSKLVVIAIANTMDLPERL 557 (767)
T ss_pred HHHHHHHCCCCCCCCCEEEEECCHHHHHCCCH----HHHHHHHCC------------CCCCCCCEEEEEECCCCCCHHHH
T ss_conf 99986541678787877999635787735209----889777407------------76789866999951656477988
Q ss_pred CC-----C--EEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 17-----2--4799825878689998999860898998625781313228999999973177410234788879999898
Q gi|254780270|r 499 MD-----R--MEIIRIAGYTEEEKLQIAKNHLVKKVLTEHALKQEECCISDGVLLDIIRLFTHEAGVRSFERALMKIARK 571 (820)
Q Consensus 499 ~d-----r--me~i~~~~y~~~ek~~i~~~~l~p~~~~~~~~~~~~~~~~~~~i~~ii~~Yt~EaGvR~l~r~i~~i~r~ 571 (820)
T Consensus 558 l~nrvsSRlg~tRi~F~pYth~qLq~Ii~~R----------L~~~-~~f~~~aielvarkVAavSG--DaRr-aldic~R 623 (767)
T KOG1514 558 LMNRVSSRLGLTRICFQPYTHEQLQEIISAR----------LKGL-DAFENKAIELVARKVAAVSG--DARR-ALDICRR 623 (767)
T ss_pred HCCCHHHHCCCEEEECCCCCHHHHHHHHHHH----------CCCH-HHCCHHHHHHHHHHHHHCCC--CHHH-HHHHHHH
T ss_conf 5431123306505513778899999999986----------0315-43142489999988775042--2788-8899899
Q ss_pred HHHHHHCC
Q ss_conf 76542117
Q gi|254780270|r 572 AVTKIVKN 579 (820)
Q Consensus 572 ~~~~~~~~ 579 (820)
T Consensus 624 A~-Eia~~ 630 (767)
T KOG1514 624 AA-EIAEE 630 (767)
T ss_pred HH-HHHHH
T ss_conf 99-97542