HHsearch alignment for GI: 254780270 and conserved domain: KOG1968
>KOG1968 consensus.
Probab=97.68 E-value=0.00018 Score=52.70 Aligned_cols=182 Identities=25% Similarity=0.312 Sum_probs=104.2
Q ss_pred HHHHHHCHHHHHHHHHHHHHHHHHCC---------CCCCC-EEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCHH
Q ss_conf 76652011689999999999998424---------44673-599860565650279999997708824998618888888
Q gi|254780270|r 337 LDQDHFGLEKVKERIIEYLAVQMRVI---------KNKGL-ILCFVGPPGVGKTSLAQSIAKATGRQYVRMSLGGVYDEA 406 (820)
Q Consensus 337 Ld~~hyGl~~vK~rile~lav~~~~~---------~~~g~-il~l~gppgvGKts~~~sia~al~r~f~~islgg~~d~~ 406 (820)
T Consensus 319 ~k~~~~~~~~~~-~~~~~l~~~k~~~~~sy~~~~~~ss~~~~~l~~G~pGigKT~~~h~~~k~~g~~v~E~Nas~~RSk~ 397 (871)
T KOG1968 319 SKALEGNASSSK-KASKWLAKSKDKEKSSYKENEPDSSKKKALLLSGPPGIGKTTAAHKAAKELGFKVVEKNASDVRSKK 397 (871)
T ss_pred HHHHHCCCCHHH-HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCC
T ss_conf 776633520366-6665887622133354002686156677887317887772056766301206540104754334422
Q ss_pred HHCCCCCCCCCCCCHHHHHHHH-------HCCCCCEEEEEECHHHHHHHCCCCHH--HHHHHHCCCCCCCCEEEEECCCC
Q ss_conf 8356320014567128999998-------32788739999331554231177115--56655406001681332010352
Q gi|254780270|r 407 DIRGHRRTYIGSMPGRIIQSLK-------RAKRSNPLLLLDEIDKMGSDLRGDPS--AALLEVLDPAQNSSFVDHYLEVE 477 (820)
Q Consensus 407 ~i~gh~~ty~ga~pg~ii~~l~-------~~~~~npv~~ldeidk~~~~~~gdp~--~allevldp~qn~~f~d~y~~~~ 477 (820)
T Consensus 398 ~l~~---~~~~~~~s~si~~~~~~~~~~~~~~~~~~vil~devD~~~~~dRg~v~~l~~l~~------------------ 456 (871)
T KOG1968 398 ELLN---KLGNATSSHSIKGSKKKKGNRQSLNSDHFLILMDEVDGMFGEDRGGVSKLSSLCK------------------ 456 (871)
T ss_pred HHHH---HHHCCCCCCCHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHH------------------
T ss_conf 7776---6402446640001111113300046660699974255442000136999999998------------------
Q ss_pred CCCCCEEEEEECCCCCCCHH-HCCCE-EEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCC
Q ss_conf 36442799993486554413-11724-79982587868999899986089899862578131322899999997317
Q gi|254780270|r 478 YDLSDVMFIMTANTLNIPLP-LMDRM-EIIRIAGYTEEEKLQIAKNHLVKKVLTEHALKQEECCISDGVLLDIIRLF 552 (820)
Q Consensus 478 ~dls~v~fi~tan~~~i~~~-l~drm-e~i~~~~y~~~ek~~i~~~~l~p~~~~~~~~~~~~~~~~~~~i~~ii~~Y 552 (820)
T Consensus 457 --ks~~Piv~~cndr~~p~sr~~~~~~~~l~f~kP~~~--------~i~~ri~s--i~~se~~ki~~~~l~~~s~~~ 521 (871)
T KOG1968 457 --KSSRPLVCTCNDRNLPKSRALSRACSDLRFSKPSSE--------LIRSRIMS--ICKSEGIKISDDVLEEISKLS 521 (871)
T ss_pred --HCCCCEEEEECCCCCCCCCCHHHHCCEEEECCCCHH--------HHHHHHHH--HHCCCCEECCCHHHHHHHHHC
T ss_conf --635776887337777665202232002340488577--------77766653--302464241727889998750