HHsearch alignment for GI: 254780270 and conserved domain: KOG2028

>KOG2028 consensus.
Probab=99.04  E-value=2.1e-08  Score=82.52  Aligned_cols=207  Identities=21%  Similarity=0.345  Sum_probs=129.9

Q ss_pred             HHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCC---EEEEECCCCCCHHHHCCCCCCCCCCCCHHHHHHHH---HCC
Q ss_conf             984244467359986056565027999999770882---49986188888888356320014567128999998---327
Q gi|254780270|r  358 QMRVIKNKGLILCFVGPPGVGKTSLAQSIAKATGRQ---YVRMSLGGVYDEADIRGHRRTYIGSMPGRIIQSLK---RAK  431 (820)
Q Consensus       358 ~~~~~~~~g~il~l~gppgvGKts~~~sia~al~r~---f~~islgg~~d~~~i~gh~~ty~ga~pg~ii~~l~---~~~  431 (820)
T Consensus       154 rs~ieq~~ipSmIlWGppG~GKTtlArlia~tsk~~SyrfvelSAt~a~-t~dvR~------------ife~aq~~~~l~  220 (554)
T KOG2028         154 RSLIEQNRIPSMILWGPPGTGKTTLARLIASTSKKHSYRFVELSATNAK-TNDVRD------------IFEQAQNEKSLT  220 (554)
T ss_pred             HHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCC-HHHHHH------------HHHHHHHHHHHH
T ss_conf             9998708887058866998765889999986057774279997414566-188999------------999988787652


Q ss_pred             CCCEEEEEECHHHHHHHCCCCHHHHHHHHCCCCCCCCEEEEEC-CCCCCCCCEEEE--EECCCC-CCCHHHCCCEEEEEE
Q ss_conf             8873999933155423117711556655406001681332010-352364427999--934865-544131172479982
Q gi|254780270|r  432 RSNPLLLLDEIDKMGSDLRGDPSAALLEVLDPAQNSSFVDHYL-EVEYDLSDVMFI--MTANTL-NIPLPLMDRMEIIRI  507 (820)
Q Consensus       432 ~~npv~~ldeidk~~~~~~gdp~~allevldp~qn~~f~d~y~-~~~~dls~v~fi--~tan~~-~i~~~l~drme~i~~  507 (820)
T Consensus       221 krkTilFiDEiHRF--------------------NksQQD~fLP~VE--~G~I~lIGATTENPSFqln~aLlSRC~VfvL  278 (554)
T KOG2028         221 KRKTILFIDEIHRF--------------------NKSQQDTFLPHVE--NGDITLIGATTENPSFQLNAALLSRCRVFVL  278 (554)
T ss_pred             CCEEEEEEHHHHHH--------------------HHHHHHCCCCEEC--CCCEEEEECCCCCCCCCHHHHHHHCCCEEEE
T ss_conf             44069873776553--------------------2321100342130--6706998536689760112778731606673


Q ss_pred             CCCCHHHHHHHHHH--HHHHHHH-HHHCCCCCCCCCCHHHHHHHHHCCCCC--CHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             58786899989998--6089899-862578131322899999997317741--023478887999989876542117852
Q gi|254780270|r  508 AGYTEEEKLQIAKN--HLVKKVL-TEHALKQEECCISDGVLLDIIRLFTHE--AGVRSFERALMKIARKAVTKIVKNSDT  582 (820)
Q Consensus       508 ~~y~~~ek~~i~~~--~l~p~~~-~~~~~~~~~~~~~~~~i~~ii~~Yt~E--aGvR~l~r~i~~i~r~~~~~~~~~~~~  582 (820)
T Consensus       279 ekL~~n~v~~iL~raia~l~dser~~~~l~n~s~~ve~siidyla~lsdGDaR~aLN~Lems~~m~~t------r~g~~~  352 (554)
T KOG2028         279 EKLPVNAVVTILMRAIASLGDSERPTDPLPNSSMFVEDSIIDYLAYLSDGDARAALNALEMSLSMFCT------RSGQSS  352 (554)
T ss_pred             CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH------HCCCCC
T ss_conf             36888999999999987632102568899983124568899999870473188887789999998875------247765


Q ss_pred             EECCCHHHHHHHHCCCCCCCCCH
Q ss_conf             01279678675305200033200
Q gi|254780270|r  583 TVSINENNLQDYLGVPRYKYGKI  605 (820)
Q Consensus       583 ~~~i~~~~l~~~lg~~~~~~~~~  605 (820)
T Consensus       353 ~~~lSidDvke~lq~s~~~YDr~  375 (554)
T KOG2028         353 RVLLSIDDVKEGLQRSHILYDRA  375 (554)
T ss_pred             CCEECHHHHHHHHHHCCCEECCC
T ss_conf             64002888999985312000455