HHsearch alignment for GI: 254780270 and conserved domain: KOG2028
>KOG2028 consensus.
Probab=99.04 E-value=2.1e-08 Score=82.52 Aligned_cols=207 Identities=21% Similarity=0.345 Sum_probs=129.9
Q ss_pred HHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCC---EEEEECCCCCCHHHHCCCCCCCCCCCCHHHHHHHH---HCC
Q ss_conf 984244467359986056565027999999770882---49986188888888356320014567128999998---327
Q gi|254780270|r 358 QMRVIKNKGLILCFVGPPGVGKTSLAQSIAKATGRQ---YVRMSLGGVYDEADIRGHRRTYIGSMPGRIIQSLK---RAK 431 (820)
Q Consensus 358 ~~~~~~~~g~il~l~gppgvGKts~~~sia~al~r~---f~~islgg~~d~~~i~gh~~ty~ga~pg~ii~~l~---~~~ 431 (820)
T Consensus 154 rs~ieq~~ipSmIlWGppG~GKTtlArlia~tsk~~SyrfvelSAt~a~-t~dvR~------------ife~aq~~~~l~ 220 (554)
T KOG2028 154 RSLIEQNRIPSMILWGPPGTGKTTLARLIASTSKKHSYRFVELSATNAK-TNDVRD------------IFEQAQNEKSLT 220 (554)
T ss_pred HHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCC-HHHHHH------------HHHHHHHHHHHH
T ss_conf 9998708887058866998765889999986057774279997414566-188999------------999988787652
Q ss_pred CCCEEEEEECHHHHHHHCCCCHHHHHHHHCCCCCCCCEEEEEC-CCCCCCCCEEEE--EECCCC-CCCHHHCCCEEEEEE
Q ss_conf 8873999933155423117711556655406001681332010-352364427999--934865-544131172479982
Q gi|254780270|r 432 RSNPLLLLDEIDKMGSDLRGDPSAALLEVLDPAQNSSFVDHYL-EVEYDLSDVMFI--MTANTL-NIPLPLMDRMEIIRI 507 (820)
Q Consensus 432 ~~npv~~ldeidk~~~~~~gdp~~allevldp~qn~~f~d~y~-~~~~dls~v~fi--~tan~~-~i~~~l~drme~i~~ 507 (820)
T Consensus 221 krkTilFiDEiHRF--------------------NksQQD~fLP~VE--~G~I~lIGATTENPSFqln~aLlSRC~VfvL 278 (554)
T KOG2028 221 KRKTILFIDEIHRF--------------------NKSQQDTFLPHVE--NGDITLIGATTENPSFQLNAALLSRCRVFVL 278 (554)
T ss_pred CCEEEEEEHHHHHH--------------------HHHHHHCCCCEEC--CCCEEEEECCCCCCCCCHHHHHHHCCCEEEE
T ss_conf 44069873776553--------------------2321100342130--6706998536689760112778731606673
Q ss_pred CCCCHHHHHHHHHH--HHHHHHH-HHHCCCCCCCCCCHHHHHHHHHCCCCC--CHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 58786899989998--6089899-862578131322899999997317741--023478887999989876542117852
Q gi|254780270|r 508 AGYTEEEKLQIAKN--HLVKKVL-TEHALKQEECCISDGVLLDIIRLFTHE--AGVRSFERALMKIARKAVTKIVKNSDT 582 (820)
Q Consensus 508 ~~y~~~ek~~i~~~--~l~p~~~-~~~~~~~~~~~~~~~~i~~ii~~Yt~E--aGvR~l~r~i~~i~r~~~~~~~~~~~~ 582 (820)
T Consensus 279 ekL~~n~v~~iL~raia~l~dser~~~~l~n~s~~ve~siidyla~lsdGDaR~aLN~Lems~~m~~t------r~g~~~ 352 (554)
T KOG2028 279 EKLPVNAVVTILMRAIASLGDSERPTDPLPNSSMFVEDSIIDYLAYLSDGDARAALNALEMSLSMFCT------RSGQSS 352 (554)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH------HCCCCC
T ss_conf 36888999999999987632102568899983124568899999870473188887789999998875------247765
Q ss_pred EECCCHHHHHHHHCCCCCCCCCH
Q ss_conf 01279678675305200033200
Q gi|254780270|r 583 TVSINENNLQDYLGVPRYKYGKI 605 (820)
Q Consensus 583 ~~~i~~~~l~~~lg~~~~~~~~~ 605 (820)
T Consensus 353 ~~~lSidDvke~lq~s~~~YDr~ 375 (554)
T KOG2028 353 RVLLSIDDVKEGLQRSHILYDRA 375 (554)
T ss_pred CCEECHHHHHHHHHHCCCEECCC
T ss_conf 64002888999985312000455