HHsearch alignment for GI: 254780270 and conserved domain: KOG2035

Probab=97.30  E-value=0.01  Score=39.31  Aligned_cols=164  Identities=24%  Similarity=0.370  Sum_probs=103.8

Q ss_pred             CCCCCCCEEEEECCCCCCHHHHHHHHHHHH-C----------CCEEE-------EECCCCC-----CHHHHCCCCCCCCC
Q ss_conf             244467359986056565027999999770-8----------82499-------8618888-----88883563200145
Q gi|254780270|r  361 VIKNKGLILCFVGPPGVGKTSLAQSIAKAT-G----------RQYVR-------MSLGGVY-----DEADIRGHRRTYIG  417 (820)
Q Consensus       361 ~~~~~g~il~l~gppgvGKts~~~sia~al-~----------r~f~~-------islgg~~-----d~~~i~gh~~ty~g  417 (820)
T Consensus        29 ~~~~d~PHll~yGPSGaGKKTrimclL~elYG~gveklki~~~t~~tpS~kklEistvsS~yHlEitPSDaG~~DR----  104 (351)
T KOG2035          29 SSTGDFPHLLVYGPSGAGKKTRIMCLLRELYGVGVEKLKIETRTFTTPSKKKLEISTVSSNYHLEITPSDAGNYDR----  104 (351)
T ss_pred             CCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCHHEEEEEEEEECCCCCEEEEEEECCCCEEEECHHHCCCCCH----
T ss_conf             1457787078888898872111899999885787245056667886488863799994256517747343375117----


Q ss_pred             CCCHHHHHHHHH-CCCCCE----------EEEEECHHHHHHHCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCCCEEEE
Q ss_conf             671289999983-278873----------999933155423117711556655406001681332010352364427999
Q gi|254780270|r  418 SMPGRIIQSLKR-AKRSNP----------LLLLDEIDKMGSDLRGDPSAALLEVLDPAQNSSFVDHYLEVEYDLSDVMFI  486 (820)
Q Consensus       418 a~pg~ii~~l~~-~~~~np----------v~~ldeidk~~~~~~gdp~~allevldp~qn~~f~d~y~~~~~dls~v~fi  486 (820)
T Consensus       105 ----vViQellKevAQt~qie~~~qr~fKvvvi~ead~LT~dAQ----~aLRRTM---------EkYs------~~~RlI  161 (351)
T KOG2035         105 ----VVIQELLKEVAQTQQIETQGQRPFKVVVINEADELTRDAQ----HALRRTM---------EKYS------SNCRLI  161 (351)
T ss_pred             ----HHHHHHHHHHHHHCCHHHCCCCCEEEEEEECHHHHHHHHH----HHHHHHH---------HHHH------CCCEEE
T ss_conf             ----9999999998741413332666548999803576508899----9999999---------9986------071699


Q ss_pred             EECCCCC-CCHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHH
Q ss_conf             9348655-441311724799825878689998999860898998625781313228999999973177410234788879
Q gi|254780270|r  487 MTANTLN-IPLPLMDRMEIIRIAGYTEEEKLQIAKNHLVKKVLTEHALKQEECCISDGVLLDIIRLFTHEAGVRSFERAL  565 (820)
Q Consensus       487 ~tan~~~-i~~~l~drme~i~~~~y~~~ek~~i~~~~l~p~~~~~~~~~~~~~~~~~~~i~~ii~~Yt~EaGvR~l~r~i  565 (820)
T Consensus       162 l~cns~SriIepIrSRCl~iRvpaps~eeI~~vl~~-----v~~k-----E~l~lp~~~l~rIa~kS~-----~nLRrAl  226 (351)
T KOG2035         162 LVCNSTSRIIEPIRSRCLFIRVPAPSDEEITSVLSK-----VLKK-----EGLQLPKELLKRIAEKSN-----RNLRRAL  226 (351)
T ss_pred             EEECCCCCCHHHHHHHEEEEECCCCCHHHHHHHHHH-----HHHH-----HCCCCCHHHHHHHHHHHC-----CCHHHHH
T ss_conf             992674302267762205876789987899999999-----9987-----334484999999999706-----4399999


Q ss_pred             H
Q ss_conf             9
Q gi|254780270|r  566 M  566 (820)
Q Consensus       566 ~  566 (820)
T Consensus       227 l  227 (351)
T KOG2035         227 L  227 (351)
T ss_pred             H
T ss_conf             9