HHsearch alignment for GI: 254780270 and conserved domain: PRK05636
>PRK05636 replicative DNA helicase; Provisional.
Probab=96.03 E-value=0.12 Score=31.17 Aligned_cols=39 Identities=26% Similarity=0.426 Sum_probs=30.2
Q ss_pred CCCCCCEEEEECCCCCCHHHHHHHHHHH----HCCCEEEEECC
Q ss_conf 4446735998605656502799999977----08824998618
Q gi|254780270|r 362 IKNKGLILCFVGPPGVGKTSLAQSIAKA----TGRQYVRMSLG 400 (820)
Q Consensus 362 ~~~~g~il~l~gppgvGKts~~~sia~a----l~r~f~~islg 400 (820)
T Consensus 263 Gl~~G~LiIiAARPsmGKTalAlnia~n~A~~~g~~v~~fSLE 305 (507)
T PRK05636 263 GLRGGQMIIVAARPGVGKSTIALDFMRSASIKNNKASVIFSLE 305 (507)
T ss_pred CCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEECC
T ss_conf 8883567999737878668999999999998769937997156