HHsearch alignment for GI: 254780270 and conserved domain: PRK06645
>PRK06645 DNA polymerase III subunits gamma and tau; Validated.
Probab=99.28 E-value=9.1e-11 Score=100.35 Aligned_cols=215 Identities=22% Similarity=0.248 Sum_probs=141.8
Q ss_pred HHHCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCC-----------------EEEEECCCC
Q ss_conf 520116899999999999984244467359986056565027999999770882-----------------499861888
Q gi|254780270|r 340 DHFGLEKVKERIIEYLAVQMRVIKNKGLILCFVGPPGVGKTSLAQSIAKATGRQ-----------------YVRMSLGGV 402 (820)
Q Consensus 340 ~hyGl~~vK~rile~lav~~~~~~~~g~il~l~gppgvGKts~~~sia~al~r~-----------------f~~islgg~ 402 (820)
T Consensus 22 ~liGQ~~~~~~l~n-----~i~~~~~~~aylf~G~rG~GKTt~Ari~ak~lnc~~~~~~~~~~~~c~~c~~c~~i~~~~~ 96 (507)
T PRK06645 22 ELQGQEVLVKVLSY-----TILNDRLAGGYLLTGIRGVGKTTSARIIAKAVNCSALITENTTIKTCEKCTNCISFNNHNH 96 (507)
T ss_pred HHCCCHHHHHHHHH-----HHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCC
T ss_conf 62393999999999-----9973996634774587997889999999999679998888998888888767899865899
Q ss_pred CCHHHHCCCCCCCCCCCCHHHHHHHHHC--CCCCEEEEEECHHHHHHHCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCC
Q ss_conf 8888835632001456712899999832--78873999933155423117711556655406001681332010352364
Q gi|254780270|r 403 YDEADIRGHRRTYIGSMPGRIIQSLKRA--KRSNPLLLLDEIDKMGSDLRGDPSAALLEVLDPAQNSSFVDHYLEVEYDL 480 (820)
Q Consensus 403 ~d~~~i~gh~~ty~ga~pg~ii~~l~~~--~~~npv~~ldeidk~~~~~~gdp~~allevldp~qn~~f~d~y~~~~~dl 480 (820)
T Consensus 97 ~dv~EiDaas~~gv~~ir-~l~~~~~~~p~~~~~kv~iidE~hmls~~a----~nallktlE-------------epp-- 156 (507)
T PRK06645 97 PDIIEIDAASKTSVDDIR-RIIESAEYKPLQGKHKIFIIDEVHMLSKGA----FNALLKTLE-------------EPP-- 156 (507)
T ss_pred CCEEEEECCCCCCHHHHH-HHHHHCCCCCCCCCEEEEEECCHHHCCHHH----HHHHHHHHH-------------CCC--
T ss_conf 985996378888889999-998635517876743589952142248999----999999742-------------786--
Q ss_pred CCEEEEEECCCCC-CCHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHH
Q ss_conf 4279999348655-441311724799825878689998999860898998625781313228999999973177410234
Q gi|254780270|r 481 SDVMFIMTANTLN-IPLPLMDRMEIIRIAGYTEEEKLQIAKNHLVKKVLTEHALKQEECCISDGVLLDIIRLFTHEAGVR 559 (820)
Q Consensus 481 s~v~fi~tan~~~-i~~~l~drme~i~~~~y~~~ek~~i~~~~l~p~~~~~~~~~~~~~~~~~~~i~~ii~~Yt~EaGvR 559 (820)
T Consensus 157 ~~~~Fi~atte~~kip~ti~srcq~f~~~~i~~~~i~~---------~l~~i~-~~E~~~~~~~al~~ia~~--a~Gs~R 224 (507)
T PRK06645 157 PHIIFIFATTEVQKIPATIISRCQRYDLRRLSFEEIFK---------LLEYIT-KQENLKADIEALRIIAYK--SEGSAR 224 (507)
T ss_pred CCEEEEEECCCHHHCCHHHHHHCEEEEEECCCHHHHHH---------HHHHHH-HHCCCCCCHHHHHHHHHH--CCCCHH
T ss_conf 44389997485364837888543278754599799999---------999999-976877778999999985--599867
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHCCC
Q ss_conf 788879999898765421178520127967867530520
Q gi|254780270|r 560 SFERALMKIARKAVTKIVKNSDTTVSINENNLQDYLGVP 598 (820)
Q Consensus 560 ~l~r~i~~i~r~~~~~~~~~~~~~~~i~~~~l~~~lg~~ 598 (820)
T Consensus 225 Dalslldqa---i~~~--~~~--~~~I~~~~V~~MLGl~ 256 (507)
T PRK06645 225 DAVSILDQA---ASMS--AKS--DNIISPQVINQMLGLV 256 (507)
T ss_pred HHHHHHHHH---HHHH--CCC--CCCCCHHHHHHHHCCC
T ss_conf 899999999---9975--489--8702699999983899