HHsearch alignment for GI: 254780270 and conserved domain: PRK06674
>PRK06674 DNA polymerase III subunits gamma and tau; Validated.
Probab=99.36 E-value=2e-10 Score=97.70 Aligned_cols=209 Identities=20% Similarity=0.316 Sum_probs=137.5
Q ss_pred HHHHCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCE-------------EEEECCCCCCH
Q ss_conf 65201168999999999999842444673599860565650279999997708824-------------99861888888
Q gi|254780270|r 339 QDHFGLEKVKERIIEYLAVQMRVIKNKGLILCFVGPPGVGKTSLAQSIAKATGRQY-------------VRMSLGGVYDE 405 (820)
Q Consensus 339 ~~hyGl~~vK~rile~lav~~~~~~~~g~il~l~gppgvGKts~~~sia~al~r~f-------------~~islgg~~d~ 405 (820)
T Consensus 16 ~dvvGQ~~v~~~L~na-----i~~~ri~HAyLF~GprGtGKts~Ari~AkaLnC~~~~~~~pC~~C~~C~~i~~g~~~Dv 90 (563)
T PRK06674 16 EDVVGQEHVTKTLQNA-----LLQEKVSHAYLFSGPRGTGKTSIAKVFAKAVNCEHAPVAEPCNECPSCLGITNGSISDV 90 (563)
T ss_pred HHHCCHHHHHHHHHHH-----HHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCE
T ss_conf 5524809999999999-----98499650343128998689999999999857999999887766878999855899877
Q ss_pred HHHCCCCCCCCCCCCHHHHHHHHH------CCCCCEEEEEECHHHHHHHCCCCHHHHHHHHCCCCCCCCEEEEECCCCCC
Q ss_conf 883563200145671289999983------27887399993315542311771155665540600168133201035236
Q gi|254780270|r 406 ADIRGHRRTYIGSMPGRIIQSLKR------AKRSNPLLLLDEIDKMGSDLRGDPSAALLEVLDPAQNSSFVDHYLEVEYD 479 (820)
Q Consensus 406 ~~i~gh~~ty~ga~pg~ii~~l~~------~~~~npv~~ldeidk~~~~~~gdp~~allevldp~qn~~f~d~y~~~~~d 479 (820)
T Consensus 91 iEiDaasn~gVd----~-IR~i~~~v~~~P~~~~yKV~IIDeah~Lt~~----A~NALLKtLE-------------EP-- 146 (563)
T PRK06674 91 LEIDAASNNGVD----E-IRDIRDKVKFAPSAVEYKVYIIDEVHMLSIG----AFNALLKTLE-------------EP-- 146 (563)
T ss_pred EEECCCCCCCHH----H-HHHHHHHHCCCCCCCCEEEEEEECHHHCCHH----HHHHHHHHHH-------------CC--
T ss_conf 985255557879----9-9999998264886787379998545637999----9999999863-------------88--
Q ss_pred CCCEEEEEECCCCC-CCHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHH
Q ss_conf 44279999348655-44131172479982587868999899986089899862578131322899999997317741023
Q gi|254780270|r 480 LSDVMFIMTANTLN-IPLPLMDRMEIIRIAGYTEEEKLQIAKNHLVKKVLTEHALKQEECCISDGVLLDIIRLFTHEAGV 558 (820)
Q Consensus 480 ls~v~fi~tan~~~-i~~~l~drme~i~~~~y~~~ek~~i~~~~l~p~~~~~~~~~~~~~~~~~~~i~~ii~~Yt~EaGv 558 (820)
T Consensus 147 P~~viFILaTtep~ki~~TI~SRCQrf~F~ri~~~~i~~r-----L~~I~-----~~E~i~~~~~aL~~Ia~~--a~Gsm 214 (563)
T PRK06674 147 PGHVIFILATTEPHKIPPTIISRCQRFDFRRISVNDIVER-----LSTVV-----TNEGTQVEDEALQIIARA--ADGGM 214 (563)
T ss_pred CCCEEEEEECCCHHHCCHHHHHHHEEEECCCCCHHHHHHH-----HHHHH-----HHCCCCCCHHHHHHHHHH--CCCCH
T ss_conf 7564999965994758478873310312788999999999-----99999-----984999878899999997--69978
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHCCC
Q ss_conf 4788879999898765421178520127967867530520
Q gi|254780270|r 559 RSFERALMKIARKAVTKIVKNSDTTVSINENNLQDYLGVP 598 (820)
Q Consensus 559 R~l~r~i~~i~r~~~~~~~~~~~~~~~i~~~~l~~~lg~~ 598 (820)
T Consensus 215 RDAlsiLdQ~~s~~-------~---~~i~~~~v~~~lG~~ 244 (563)
T PRK06674 215 RDALSLLDQAISFS-------D---ERVTTEDVLAVTGAV 244 (563)
T ss_pred HHHHHHHHHHHHHC-------C---CCCCHHHHHHHHCCC
T ss_conf 89999999999715-------9---976899999986899