HHsearch alignment for GI: 254780270 and conserved domain: PRK06872

Probab=98.75  E-value=3.3e-07  Score=73.43  Aligned_cols=167  Identities=21%  Similarity=0.263  Sum_probs=115.8

Q ss_pred             HHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCC-------------CEEEEECCCCCCHHHHCCCCCCCCCCCCHHHH
Q ss_conf             98424446735998605656502799999977088-------------24998618888888835632001456712899
Q gi|254780270|r  358 QMRVIKNKGLILCFVGPPGVGKTSLAQSIAKATGR-------------QYVRMSLGGVYDEADIRGHRRTYIGSMPGRII  424 (820)
Q Consensus       358 ~~~~~~~~g~il~l~gppgvGKts~~~sia~al~r-------------~f~~islgg~~d~~~i~gh~~ty~ga~pg~ii  424 (820)
T Consensus        30 ~a~~~~r~~haylf~g~rg~gktt~ari~ak~lnc~~~~~~~pcg~c~~c~~i~~g~~~d~~eidaas~~~v~~~-----  104 (696)
T PRK06872         30 NGLKENRLHHAYLFSGTRGVGKTSIARLFAKGLNCVHGVTATPCGECENCKAIEEGNFIDLIEIDAASRTKVEDT-----  104 (696)
T ss_pred             HHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCHHHH-----
T ss_conf             999719863047511789888889999999986789999999788862257674478775467505655788999-----


Q ss_pred             HHHHHC------CCCCEEEEEECHHHHHHHCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCC-CCHH
Q ss_conf             999832------788739999331554231177115566554060016813320103523644279999348655-4413
Q gi|254780270|r  425 QSLKRA------KRSNPLLLLDEIDKMGSDLRGDPSAALLEVLDPAQNSSFVDHYLEVEYDLSDVMFIMTANTLN-IPLP  497 (820)
Q Consensus       425 ~~l~~~------~~~npv~~ldeidk~~~~~~gdp~~allevldp~qn~~f~d~y~~~~~dls~v~fi~tan~~~-i~~~  497 (820)
T Consensus       105 r~l~~~~~~~p~~~~~kvy~idevhmls~~~----fnallktle-------------epp--~~v~f~latt~~~k~p~t  165 (696)
T PRK06872        105 RELLDNVQYKPVVGRFKVYLIDEVHMLSRHS----FNALLKTLE-------------EPP--EYVKFLLATTDPQKLPIT  165 (696)
T ss_pred             HHHHHHCCCCCCCCCEEEEEEEHHHHCCHHH----HHHHHHHHC-------------CCC--CCEEEEEECCCHHHCCHH
T ss_conf             9999845457767754799970054438999----999987502-------------797--544899843863227488


Q ss_pred             HCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHH
Q ss_conf             117247998258786899989998608989986257813132289999999731774102347
Q gi|254780270|r  498 LMDRMEIIRIAGYTEEEKLQIAKNHLVKKVLTEHALKQEECCISDGVLLDIIRLFTHEAGVRS  560 (820)
Q Consensus       498 l~drme~i~~~~y~~~ek~~i~~~~l~p~~~~~~~~~~~~~~~~~~~i~~ii~~Yt~EaGvR~  560 (820)
T Consensus       166 ilsrc~~f~~~~~~~~~i~~---------~l~~i-~~~e~~~~~~~al~~~a~~--a~gs~rd  216 (696)
T PRK06872        166 ILSRCMQFHLKALDQTQIAQ---------HLEFI-LTQENIPFESPALEKLAKA--AQGSIRD  216 (696)
T ss_pred             HHHHHHHEECCCCCHHHHHH---------HHHHH-HHHCCCCCCHHHHHHHHHH--CCCCHHH
T ss_conf             98766530026899999999---------99999-9984997799999999997--5895677