HHsearch alignment for GI: 254780270 and conserved domain: PRK06964

Probab=97.37  E-value=0.00078  Score=47.85  Aligned_cols=139  Identities=17%  Similarity=0.233  Sum_probs=84.0

Q ss_pred             CCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCE---EEEECCCCCCHHHH-CC-CCCC-CC-------------------
Q ss_conf             444673599860565650279999997708824---99861888888883-56-3200-14-------------------
Q gi|254780270|r  362 IKNKGLILCFVGPPGVGKTSLAQSIAKATGRQY---VRMSLGGVYDEADI-RG-HRRT-YI-------------------  416 (820)
Q Consensus       362 ~~~~g~il~l~gppgvGKts~~~sia~al~r~f---~~islgg~~d~~~i-~g-h~~t-y~-------------------  416 (820)
T Consensus        17 ~~rl~HA~Lf~Gp~G~Gk~~lA~~~A~~llC~~~~~~~~~Cg~C~sC~~~~~~~HPD~~~i~Pe~~~~~~~~~~~~~~~~   96 (342)
T PRK06964         17 RARWPHALLLHGQAGIGKLAFAQHLAQGLLCETPQPNGEPCGTCAACTWFAQGNHPDYRIVRPEALAAEAPGAADDAKAA   96 (342)
T ss_pred             CCCHHEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEECCCHHCCCCCCCCCHHHHH
T ss_conf             68713057657999867999999999998389999888978677778888627999745534002102233321001011


Q ss_pred             -----C---CCCHH-----HHHHHHH------CCCCCEEEEEECHHHHHHHCCCCHHHHHHHHCCCCCCCCEEEEECCCC
Q ss_conf             -----5---67128-----9999983------278873999933155423117711556655406001681332010352
Q gi|254780270|r  417 -----G---SMPGR-----IIQSLKR------AKRSNPLLLLDEIDKMGSDLRGDPSAALLEVLDPAQNSSFVDHYLEVE  477 (820)
Q Consensus       417 -----g---a~pg~-----ii~~l~~------~~~~npv~~ldeidk~~~~~~gdp~~allevldp~qn~~f~d~y~~~~  477 (820)
T Consensus        97 ~~~~~~~~~~~~~~~I~idqiR~l~~~l~~~~~~g~~kVviI~~Ae~mn~----~aaNalLK~LE-------------EP  159 (342)
T PRK06964         97 DADEGGKKTRAPSKEIKIEQVRALLDFCGVGSHRGGARVVVLYPAEALNV----AAANALLKTLE-------------EP  159 (342)
T ss_pred             HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHCH----HHHHHHHHHHC-------------CC
T ss_conf             12221012356556454999999999970075458844999827787389----99999999723-------------79


Q ss_pred             CCCCCEEEEEECCCCC-CCHHHCCCEEEEEECCCCHHHHHHHH
Q ss_conf             3644279999348655-44131172479982587868999899
Q gi|254780270|r  478 YDLSDVMFIMTANTLN-IPLPLMDRMEIIRIAGYTEEEKLQIA  519 (820)
Q Consensus       478 ~dls~v~fi~tan~~~-i~~~l~drme~i~~~~y~~~ek~~i~  519 (820)
T Consensus       160 p--~~~~~iL~~~~~~~llpTI~SRcq~~~~~~~~~~~~~~~L  200 (342)
T PRK06964        160 P--PGVVFLLVSARIDRLLPTILSRCRQWPMTVPAPEAAAAWL  200 (342)
T ss_pred             C--CCEEEEEEECCHHHCCHHHHHCCEEECCCCCCHHHHHHHH
T ss_conf             8--7848999869925483688767643028995999999999