HHsearch alignment for GI: 254780270 and conserved domain: PRK07132
>PRK07132 DNA polymerase III subunit delta'; Validated.
Probab=98.60 E-value=8.2e-07 Score=70.42 Aligned_cols=145 Identities=11% Similarity=0.163 Sum_probs=89.9
Q ss_pred HHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEE-EEECCCCC-CHHHHCCCCCCCCCCCCHHHHHH
Q ss_conf 99999999998424446735998605656502799999977088249-98618888-88883563200145671289999
Q gi|254780270|r 349 ERIIEYLAVQMRVIKNKGLILCFVGPPGVGKTSLAQSIAKATGRQYV-RMSLGGVY-DEADIRGHRRTYIGSMPGRIIQS 426 (820)
Q Consensus 349 ~rile~lav~~~~~~~~g~il~l~gppgvGKts~~~sia~al~r~f~-~islgg~~-d~~~i~gh~~ty~ga~pg~ii~~ 426 (820)
T Consensus 4 e~iv~~L-~nai~~~klsHAYLF~G~~G~Gk~~~a~~~a~~l~~~~~~~~~~~~~~~~~~~id~~~~---~i~~~~i~~~ 79 (303)
T PRK07132 4 NNIIKSL-DNLAKQNKISHSFLLKSNYNNDLDESILYFLNKFNNLQSLNLNLEELPYNIFLFDIFDE---DLSKEEFLSA 79 (303)
T ss_pred HHHHHHH-HHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCC---CHHHHHHHHH
T ss_conf 3899999-99998499761688678998679999999999972998788875456532304133222---0016889999
Q ss_pred HHHC---C---CCCEEEEEECHHHHHHHCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCC-CCHHHC
Q ss_conf 9832---7---88739999331554231177115566554060016813320103523644279999348655-441311
Q gi|254780270|r 427 LKRA---K---RSNPLLLLDEIDKMGSDLRGDPSAALLEVLDPAQNSSFVDHYLEVEYDLSDVMFIMTANTLN-IPLPLM 499 (820)
Q Consensus 427 l~~~---~---~~npv~~ldeidk~~~~~~gdp~~allevldp~qn~~f~d~y~~~~~dls~v~fi~tan~~~-i~~~l~ 499 (820)
T Consensus 80 i~~~~~~~~~~~~~Kv~IIdea~~lt~~----A~NaLLKtLE-------------EPp--~~~~fil~t~~~~~il~TI~ 140 (303)
T PRK07132 80 IEKFSFSSFVSNQKKILIIKNIEKTSNS----SLNALLKTIE-------------EPS--KNTYFLLTTKNINKVIPTIV 140 (303)
T ss_pred HHHHHHCCCCCCCEEEEEEECHHHCCHH----HHHHHHHHCC-------------CCC--CCEEEEEEECCHHHCCHHHH
T ss_conf 9999736655687069998165533999----9999998703-------------898--68489997288243837786
Q ss_pred CCEEEEEECCCCHHHHH
Q ss_conf 72479982587868999
Q gi|254780270|r 500 DRMEIIRIAGYTEEEKL 516 (820)
Q Consensus 500 drme~i~~~~y~~~ek~ 516 (820)
T Consensus 141 SRCq~~~f~~~~~~~i~ 157 (303)
T PRK07132 141 SRCQVINVKEPDQQKIL 157 (303)
T ss_pred HCCEEEECCCCCHHHHH
T ss_conf 36656637889999999