HHsearch alignment for GI: 254780270 and conserved domain: PRK07270
>PRK07270 DNA polymerase III subunits gamma and tau; Validated.
Probab=99.38 E-value=1.6e-11 Score=106.11 Aligned_cols=189 Identities=22% Similarity=0.312 Sum_probs=127.5
Q ss_pred HHHHCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCE-------------EEEECCCCCCH
Q ss_conf 65201168999999999999842444673599860565650279999997708824-------------99861888888
Q gi|254780270|r 339 QDHFGLEKVKERIIEYLAVQMRVIKNKGLILCFVGPPGVGKTSLAQSIAKATGRQY-------------VRMSLGGVYDE 405 (820)
Q Consensus 339 ~~hyGl~~vK~rile~lav~~~~~~~~g~il~l~gppgvGKts~~~sia~al~r~f-------------~~islgg~~d~ 405 (820)
T Consensus 15 ~dvvGQe~i~~~L~nal-----~~~ri~HAyLF~GP~GtGKts~ArifAkaLnC~~~~~~~pC~~C~~C~~i~~g~~~Dv 89 (557)
T PRK07270 15 DEMVGQEVVATTLKQAV-----ESGKISHAYLFSGPRGTGKTSAAKIFAKAMNCPNQVDGEPCNNCDICRDITNGSLEDV 89 (557)
T ss_pred HHHCCHHHHHHHHHHHH-----HCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCE
T ss_conf 67148199999999999-----8599540442108998689999999999957999899998887779999875899974
Q ss_pred HHHCCCCCCCCCCCCHHHHHHHHHC------CCCCEEEEEECHHHHHHHCCCCHHHHHHHHCCCCCCCCEEEEECCCCCC
Q ss_conf 8835632001456712899999832------7887399993315542311771155665540600168133201035236
Q gi|254780270|r 406 ADIRGHRRTYIGSMPGRIIQSLKRA------KRSNPLLLLDEIDKMGSDLRGDPSAALLEVLDPAQNSSFVDHYLEVEYD 479 (820)
Q Consensus 406 ~~i~gh~~ty~ga~pg~ii~~l~~~------~~~npv~~ldeidk~~~~~~gdp~~allevldp~qn~~f~d~y~~~~~d 479 (820)
T Consensus 90 iEidaas~~gVd-----~IRei~~~~~~~P~~~~yKV~IIDEah~Ls~~----A~NALLKtLE-------------EPP- 146 (557)
T PRK07270 90 IEIDAASNNGVD-----EIRDIRDKSTYAPSRATYKVYIIDEVHMLSTG----AFNALLKTLE-------------EPT- 146 (557)
T ss_pred EEECCCCCCCHH-----HHHHHHHHHCCCCCCCCEEEEEECCHHHCCHH----HHHHHHHHHH-------------CCC-
T ss_conf 873477767889-----99999998423877788389997144534999----9998999852-------------899-
Q ss_pred CCCEEEEEECCCCC-CCHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHH
Q ss_conf 44279999348655-44131172479982587868999899986089899862578131322899999997317741023
Q gi|254780270|r 480 LSDVMFIMTANTLN-IPLPLMDRMEIIRIAGYTEEEKLQIAKNHLVKKVLTEHALKQEECCISDGVLLDIIRLFTHEAGV 558 (820)
Q Consensus 480 ls~v~fi~tan~~~-i~~~l~drme~i~~~~y~~~ek~~i~~~~l~p~~~~~~~~~~~~~~~~~~~i~~ii~~Yt~EaGv 558 (820)
T Consensus 147 -~~~vFIL~Ttep~kIl~TI~SRCQrf~F~~i~~~~i~~~-----L~~I~-----~~E~i~~~~~aL~~Ia~~--a~G~m 213 (557)
T PRK07270 147 -ENVVFILATTELHKIPATILSRVQRFEFKSIKTKAIREH-----LAWIL-----DKEGISFEVEALNLIARR--AEGGM 213 (557)
T ss_pred -CCEEEEEEECCHHHCCHHHHHHHHHCCCCCCCHHHHHHH-----HHHHH-----HHCCCCCCHHHHHHHHHH--CCCCH
T ss_conf -876999984994759288874300010888999999999-----99999-----983998699999999997--79968
Q ss_pred HHHHHHHHHH
Q ss_conf 4788879999
Q gi|254780270|r 559 RSFERALMKI 568 (820)
Q Consensus 559 R~l~r~i~~i 568 (820)
T Consensus 214 RdAlsiLdQ~ 223 (557)
T PRK07270 214 RDALSILDQA 223 (557)
T ss_pred HHHHHHHHHH
T ss_conf 7899999999