HHsearch alignment for GI: 254780270 and conserved domain: PRK07940
>PRK07940 DNA polymerase III subunit delta'; Validated.
Probab=98.52 E-value=5.2e-07 Score=71.93 Aligned_cols=159 Identities=15% Similarity=0.229 Sum_probs=95.8
Q ss_pred HHHCHHHHHHHHHHHHHHHH-------HCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEE-EECCCCCCHHHH-CC
Q ss_conf 52011689999999999998-------4244467359986056565027999999770882499-861888888883-56
Q gi|254780270|r 340 DHFGLEKVKERIIEYLAVQM-------RVIKNKGLILCFVGPPGVGKTSLAQSIAKATGRQYVR-MSLGGVYDEADI-RG 410 (820)
Q Consensus 340 ~hyGl~~vK~rile~lav~~-------~~~~~~g~il~l~gppgvGKts~~~sia~al~r~f~~-islgg~~d~~~i-~g 410 (820)
T Consensus 6 ~ivGQe~v~~~L~~A~~~~R~~~~~~~~~~~~~~HAyLF~Gp~G~Gk~~~A~~~A~~l~C~~~~~~~cg~C~~C~~i~~g 85 (395)
T PRK07940 6 RLVGQDAVVAELRAAARAARADSAHSAAAGSGMTHAWLFTGPPGSGRSNAARAFAAALQCTDPGVPGCGECRACRTVLAG 85 (395)
T ss_pred HHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCC
T ss_conf 31592999999999998363434433334687660376368998788999999999966999999999878789998768
Q ss_pred -C-CCCCC---CCCCH-HHHHHHHH------CCCCCEEEEEECHHHHHHHCCCCHHHHHHHHCCCCCCCCEEEEECCCCC
Q ss_conf -3-20014---56712-89999983------2788739999331554231177115566554060016813320103523
Q gi|254780270|r 411 -H-RRTYI---GSMPG-RIIQSLKR------AKRSNPLLLLDEIDKMGSDLRGDPSAALLEVLDPAQNSSFVDHYLEVEY 478 (820)
Q Consensus 411 -h-~~ty~---ga~pg-~ii~~l~~------~~~~npv~~ldeidk~~~~~~gdp~~allevldp~qn~~f~d~y~~~~~ 478 (820)
T Consensus 86 ~hpDv~~i~p~~~~i~id~iR~l~~~~~~~p~~~~~kv~ii~~a~~m~~~----a~NalLKtL-------------EEPp 148 (395)
T PRK07940 86 THPDVRVVVPEGLSIGVDEVREIVQIAARRPTTGRWRIVVIEDADRLTER----AANALLKAV-------------EEPP 148 (395)
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHCHH----HHHHHHHHH-------------CCCC
T ss_conf 99871898268776889999999999852730379559998077874899----999999852-------------1788
Q ss_pred CCCCEEEEEECCCCC-CCHHHCCCEEEEEECCCCHHHHHH
Q ss_conf 644279999348655-441311724799825878689998
Q gi|254780270|r 479 DLSDVMFIMTANTLN-IPLPLMDRMEIIRIAGYTEEEKLQ 517 (820)
Q Consensus 479 dls~v~fi~tan~~~-i~~~l~drme~i~~~~y~~~ek~~ 517 (820)
T Consensus 149 --~~~~fiL~t~~~~~llpTI~SRcq~~~f~~~~~~~i~~ 186 (395)
T PRK07940 149 --PRTVWLLCAPSVEDVLPTIRSRCRHVALRTPSVEAVAD 186 (395)
T ss_pred --CCEEEEEEECCHHHHHHHHHHHHEECCCCCCCHHHHHH
T ss_conf --88699987399787446887440002379999999999