HHsearch alignment for GI: 254780270 and conserved domain: PRK07994
>PRK07994 DNA polymerase III subunits gamma and tau; Validated.
Probab=98.83 E-value=7e-08 Score=78.52 Aligned_cols=171 Identities=20% Similarity=0.290 Sum_probs=116.7
Q ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHCCC-------------EEEEECCCCCCHHHHCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 4467359986056565027999999770882-------------499861888888883563200145671289999983
Q gi|254780270|r 363 KNKGLILCFVGPPGVGKTSLAQSIAKATGRQ-------------YVRMSLGGVYDEADIRGHRRTYIGSMPGRIIQSLKR 429 (820)
Q Consensus 363 ~~~g~il~l~gppgvGKts~~~sia~al~r~-------------f~~islgg~~d~~~i~gh~~ty~ga~pg~ii~~l~~ 429 (820)
T Consensus 35 ~r~~haylf~G~rG~GKtt~ari~ak~lnc~~~~~~~pcg~c~~c~~i~~g~~~d~~eidaas~~~vd~~re-l~~~~~y 113 (643)
T PRK07994 35 GRIHHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRD-LLDNVQY 113 (643)
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCHHHHHH-HHHHCCC
T ss_conf 986634874589988888999999999679999999978767768988658988758863677788899999-9984466
Q ss_pred --CCCCCEEEEEECHHHHHHHCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCC-CCHHHCCCEEEEE
Q ss_conf --2788739999331554231177115566554060016813320103523644279999348655-4413117247998
Q gi|254780270|r 430 --AKRSNPLLLLDEIDKMGSDLRGDPSAALLEVLDPAQNSSFVDHYLEVEYDLSDVMFIMTANTLN-IPLPLMDRMEIIR 506 (820)
Q Consensus 430 --~~~~npv~~ldeidk~~~~~~gdp~~allevldp~qn~~f~d~y~~~~~dls~v~fi~tan~~~-i~~~l~drme~i~ 506 (820)
T Consensus 114 ~p~~~r~kvyiidEvhmls~~a----fnalLKtlE-------------eP--p~hv~filaTT~~~k~p~TilSRC~~f~ 174 (643)
T PRK07994 114 APARGRFKVYLIDEVHMLSRHS----FNALLKTLE-------------EP--PAHVKFLLATTDPQKLPVTILSRCLQFH 174 (643)
T ss_pred CCCCCCEEEEEEECHHHCCHHH----HHHHHHHHC-------------CC--CHHCEEEEECCCHHHCCHHHHHHHHHEE
T ss_conf 8877853699972210158999----999998623-------------78--6100899860774548478997776500
Q ss_pred ECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHH
Q ss_conf 25878689998999860898998625781313228999999973177410234788879
Q gi|254780270|r 507 IAGYTEEEKLQIAKNHLVKKVLTEHALKQEECCISDGVLLDIIRLFTHEAGVRSFERAL 565 (820)
Q Consensus 507 ~~~y~~~ek~~i~~~~l~p~~~~~~~~~~~~~~~~~~~i~~ii~~Yt~EaGvR~l~r~i 565 (820)
T Consensus 175 ~~~~~~~~i~~---------~l~~i-~~~e~i~~~~~al~~ia~~--a~gs~rdalsl~ 221 (643)
T PRK07994 175 LKALDVEQIRH---------QLEHI-LNEEHIAHEPRALQLLARA--ADGSLRDALSLT 221 (643)
T ss_pred CCCCCHHHHHH---------HHHHH-HHHCCCCCCHHHHHHHHHH--CCCCHHHHHHHH
T ss_conf 16699999999---------99999-9975998788999999997--478656688899