HHsearch alignment for GI: 254780270 and conserved domain: PRK08451
>PRK08451 DNA polymerase III subunits gamma and tau; Validated.
Probab=99.29 E-value=6e-11 Score=101.70 Aligned_cols=208 Identities=20% Similarity=0.228 Sum_probs=133.2
Q ss_pred HHHHCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCC-------------EEEEECCCCCCH
Q ss_conf 6520116899999999999984244467359986056565027999999770882-------------499861888888
Q gi|254780270|r 339 QDHFGLEKVKERIIEYLAVQMRVIKNKGLILCFVGPPGVGKTSLAQSIAKATGRQ-------------YVRMSLGGVYDE 405 (820)
Q Consensus 339 ~~hyGl~~vK~rile~lav~~~~~~~~g~il~l~gppgvGKts~~~sia~al~r~-------------f~~islgg~~d~ 405 (820)
T Consensus 14 ~evIGQe~iv~~L~nA-----i~~~Rl~HAYLFsGPrGvGKTt~ArifAkaLnC~~~~~~~PCg~C~sC~~i~~g~hpDV 88 (523)
T PRK08451 14 DELIGQESVSKTLSLA-----LDNNRLAHAYLFSGLRGSGKTSSARIFSRALVCEQGPSSTPCGTCAQCQAALEGRHIDI 88 (523)
T ss_pred HHCCCCHHHHHHHHHH-----HHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCE
T ss_conf 4404949999999999-----98599671587578998688999999999975999999898887888999864899985
Q ss_pred HHHCCCCCCCCCCCCHHHHHHHHHC------CCCCEEEEEECHHHHHHHCCCCHHHHHHHHCCCCCCCCEEEEECCCCCC
Q ss_conf 8835632001456712899999832------7887399993315542311771155665540600168133201035236
Q gi|254780270|r 406 ADIRGHRRTYIGSMPGRIIQSLKRA------KRSNPLLLLDEIDKMGSDLRGDPSAALLEVLDPAQNSSFVDHYLEVEYD 479 (820)
Q Consensus 406 ~~i~gh~~ty~ga~pg~ii~~l~~~------~~~npv~~ldeidk~~~~~~gdp~~allevldp~qn~~f~d~y~~~~~d 479 (820)
T Consensus 89 iEiDaasn~gID~-----IReLie~~~~~P~~gryKV~IIDEah~Lt~~----A~NALLKTLE-------------EPP- 145 (523)
T PRK08451 89 IEMDAASNRGIDD-----IRNLIEQTKYKPSMARFKIFIIDEVHMLTKE----AFNALLKTLE-------------EPP- 145 (523)
T ss_pred EEECCCCCCCHHH-----HHHHHHHHCCCCCCCCEEEEEEECCCCCCHH----HHHHHHHHCC-------------CCC-
T ss_conf 5105533368999-----9999997235886797279998260304899----9999999703-------------898-
Q ss_pred CCCEEEEEECCCCC-CCHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHH
Q ss_conf 44279999348655-44131172479982587868999899986089899862578131322899999997317741023
Q gi|254780270|r 480 LSDVMFIMTANTLN-IPLPLMDRMEIIRIAGYTEEEKLQIAKNHLVKKVLTEHALKQEECCISDGVLLDIIRLFTHEAGV 558 (820)
Q Consensus 480 ls~v~fi~tan~~~-i~~~l~drme~i~~~~y~~~ek~~i~~~~l~p~~~~~~~~~~~~~~~~~~~i~~ii~~Yt~EaGv 558 (820)
T Consensus 146 -~~vvFILaTTep~KLp~TIlSRCQ~f~Fk~I~~~~I~~---------~L~~I-~~~E~i~~e~~AL~~IA~~--a~Gsl 212 (523)
T PRK08451 146 -SYVKFILATTDPLKLPATILSRTQHFRFKQIPQNSIIS---------HLKTI-LNKEGVSYEPEALEILARS--GSGSL 212 (523)
T ss_pred -CCCEEEEECCCHHHCHHHHHHHHHCCCCCCCCHHHHHH---------HHHHH-HHHCCCCCCHHHHHHHHHH--CCCCH
T ss_conf -78379997599476848887420311033799999999---------99999-9983998799999999997--78948
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHCC
Q ss_conf 478887999989876542117852012796786753052
Q gi|254780270|r 559 RSFERALMKIARKAVTKIVKNSDTTVSINENNLQDYLGV 597 (820)
Q Consensus 559 R~l~r~i~~i~r~~~~~~~~~~~~~~~i~~~~l~~~lg~ 597 (820)
T Consensus 213 RDalslLdQ~i~~~----------~~~i~~~~v~~~lG~ 241 (523)
T PRK08451 213 RDTLTLLDQAIIFC----------KNAITESKVADMLGL 241 (523)
T ss_pred HHHHHHHHHHHHHC----------CCCCCHHHHHHHHCC
T ss_conf 68987999999847----------998779999998588