HHsearch alignment for GI: 254780270 and conserved domain: PRK08727

>PRK08727 hypothetical protein; Validated.
Probab=98.53  E-value=1.2e-05  Score=61.71  Aligned_cols=181  Identities=19%  Similarity=0.309  Sum_probs=114.6

Q ss_pred             CCCCCEEEEECCCCCCHHHHHHHHH---HHHCCCEEEEECCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEE
Q ss_conf             4467359986056565027999999---7708824998618888888835632001456712899999832788739999
Q gi|254780270|r  363 KNKGLILCFVGPPGVGKTSLAQSIA---KATGRQYVRMSLGGVYDEADIRGHRRTYIGSMPGRIIQSLKRAKRSNPLLLL  439 (820)
Q Consensus       363 ~~~g~il~l~gppgvGKts~~~sia---~al~r~f~~islgg~~d~~~i~gh~~ty~ga~pg~ii~~l~~~~~~npv~~l  439 (820)
T Consensus        38 ~~~~~~lyl~G~~GsGKTHLl~a~~~~~~~~~~~~~yl~l~~~~~-------------~~~~-~l~~l----e~~~ll~i   99 (233)
T PRK08727         38 GQSSDWLYLSGPAGTGKTHLALSLCAAAEQAGRSSAYLPLQAAAG-------------RLRD-ALEAL----EGRSLVAL   99 (233)
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHHH-------------HHHH-HHHHH----CCCCEEEE
T ss_conf             888898999899999889999999999982799728844788532-------------0256-77531----03897898


Q ss_pred             ECHHHHHHHCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCCCEEEEEECCCC----CCCHH-HCCC---EEEEEECCCC
Q ss_conf             33155423117711556655406001681332010352364427999934865----54413-1172---4799825878
Q gi|254780270|r  440 DEIDKMGSDLRGDPSAALLEVLDPAQNSSFVDHYLEVEYDLSDVMFIMTANTL----NIPLP-LMDR---MEIIRIAGYT  511 (820)
Q Consensus       440 deidk~~~~~~gdp~~allevldp~qn~~f~d~y~~~~~dls~v~fi~tan~~----~i~~~-l~dr---me~i~~~~y~  511 (820)
T Consensus       100 DDid~i~g~~--~~e~aLFhL~N~~-------------~~-~~~~ll~ts~~~P~~l~~~l~DL~SRL~~~~~~~l~~~d  163 (233)
T PRK08727        100 DGVDSIAGQR--EDEVALFDFHNRA-------------RA-AGITLLYTARQMPDGLALVLPDLRSRLSQCIRIGLPVLD  163 (233)
T ss_pred             ECCHHCCCCH--HHHHHHHHHHHHH-------------HH-CCCEEEEECCCCHHHHCCCHHHHHHHHHCCCEEEECCCC
T ss_conf             5501126982--7999999999999-------------86-198389977989566231002199999669228857889


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHH
Q ss_conf             68999899986089899862578131322899999997317741023478887999989876542117852012796786
Q gi|254780270|r  512 EEEKLQIAKNHLVKKVLTEHALKQEECCISDGVLLDIIRLFTHEAGVRSFERALMKIARKAVTKIVKNSDTTVSINENNL  591 (820)
Q Consensus       512 ~~ek~~i~~~~l~p~~~~~~~~~~~~~~~~~~~i~~ii~~Yt~EaGvR~l~r~i~~i~r~~~~~~~~~~~~~~~i~~~~l  591 (820)
T Consensus       164 D~~~~~iL~~~a-----~-----~rgl~l~~~V~~Yll~r~~R~--~~~l~~~l~~LD~~SL~~-------kr~iTip~v  224 (233)
T PRK08727        164 DVARAAVLRDRA-----Q-----RRGLALDEAAIDWLLTHGERE--LAGLVALLDRLDRESLAA-------KRRITVPFL  224 (233)
T ss_pred             HHHHHHHHHHHH-----H-----HCCCCCCHHHHHHHHHHCCCC--HHHHHHHHHHHHHHHHHC-------CCCCCHHHH
T ss_conf             799999999999-----9-----869999989999999856889--999999999999999980-------898889999


Q ss_pred             HHHHC
Q ss_conf             75305
Q gi|254780270|r  592 QDYLG  596 (820)
Q Consensus       592 ~~~lg  596 (820)
T Consensus       225 k~vL~  229 (233)
T PRK08727        225 RRVLE  229 (233)
T ss_pred             HHHHH
T ss_conf             99997