HHsearch alignment for GI: 254780270 and conserved domain: PRK08770

>PRK08770 DNA polymerase III subunits gamma and tau; Validated.
Probab=98.60  E-value=8e-07  Score=70.49  Aligned_cols=197  Identities=18%  Similarity=0.265  Sum_probs=129.1

Q ss_pred             HCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCC-------------EEEEECCCCCCHHHHCCCCCCCCCCCCHHHHHH
Q ss_conf             4244467359986056565027999999770882-------------499861888888883563200145671289999
Q gi|254780270|r  360 RVIKNKGLILCFVGPPGVGKTSLAQSIAKATGRQ-------------YVRMSLGGVYDEADIRGHRRTYIGSMPGRIIQS  426 (820)
Q Consensus       360 ~~~~~~g~il~l~gppgvGKts~~~sia~al~r~-------------f~~islgg~~d~~~i~gh~~ty~ga~pg~ii~~  426 (820)
T Consensus        32 ~~~~~~~~a~lf~g~rg~gkt~~ar~~a~~lnc~~~~~~~pc~~c~~c~~i~~~~~~d~~e~daas~~~v~~~r~-~~~~  110 (663)
T PRK08770         32 LDSGRVHHAFLFTGTRGVGKTTIARIFAKSLNCETGTSADPCGQCPACLDIDAGRYIDLLEIDAASNTGVDDVRE-VIEN  110 (663)
T ss_pred             HHCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCHHHHHH-HHHH
T ss_conf             970997404762279988888999999998678999999978778778988548988658864676588899999-9984


Q ss_pred             HHH--CCCCCEEEEEECHHHHHHHCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCC-CCHHHCCCEE
Q ss_conf             983--2788739999331554231177115566554060016813320103523644279999348655-4413117247
Q gi|254780270|r  427 LKR--AKRSNPLLLLDEIDKMGSDLRGDPSAALLEVLDPAQNSSFVDHYLEVEYDLSDVMFIMTANTLN-IPLPLMDRME  503 (820)
Q Consensus       427 l~~--~~~~npv~~ldeidk~~~~~~gdp~~allevldp~qn~~f~d~y~~~~~dls~v~fi~tan~~~-i~~~l~drme  503 (820)
T Consensus       111 ~~~~p~~~~~kvy~idevhmls~~~----fna~lktle-------------epp--~~v~f~~att~~~k~p~t~~src~  171 (663)
T PRK08770        111 AQYMPSRGKFKVYLIDEVHMLSKAA----FNALLKTLE-------------EPP--EHVKFLLATTDPQKLPVTVLSRCL  171 (663)
T ss_pred             CCCCCCCCCEEEEEEECHHHCCHHH----HHHHHHHHC-------------CCC--CCEEEEEECCCHHHCCHHHHHHHH
T ss_conf             4358877743699970043328999----999987402-------------786--442899854873337489998887


Q ss_pred             EEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCE
Q ss_conf             99825878689998999860898998625781313228999999973177410234788879999898765421178520
Q gi|254780270|r  504 IIRIAGYTEEEKLQIAKNHLVKKVLTEHALKQEECCISDGVLLDIIRLFTHEAGVRSFERALMKIARKAVTKIVKNSDTT  583 (820)
Q Consensus       504 ~i~~~~y~~~ek~~i~~~~l~p~~~~~~~~~~~~~~~~~~~i~~ii~~Yt~EaGvR~l~r~i~~i~r~~~~~~~~~~~~~  583 (820)
T Consensus       172 ~f~~~~~~~~~~~~---------~l~~-~~~~e~~~~~~~~~~~~~~~--~~gs~rd~lsl~~q~~~-----~--~---~  229 (663)
T PRK08770        172 QFNLKRLDEDQIQG---------QMTR-ILAAEQIESDPSAIVQLSKA--ADGSLRDGLSLLDQAIA-----Y--A---G  229 (663)
T ss_pred             HCCCCCCCHHHHHH---------HHHH-HHHHCCCCCCHHHHHHHHHH--CCCCHHHHHHHHHHHHH-----H--C---C
T ss_conf             63437799999999---------9999-99983997699999999997--47856778889999998-----6--6---8


Q ss_pred             ECCCHHHHHHHHCCC
Q ss_conf             127967867530520
Q gi|254780270|r  584 VSINENNLQDYLGVP  598 (820)
Q Consensus       584 ~~i~~~~l~~~lg~~  598 (820)
T Consensus       230 ~~~~~~~v~~mlg~~  244 (663)
T PRK08770        230 GALREDVVRTMLGTV  244 (663)
T ss_pred             CCCCHHHHHHHHCCC
T ss_conf             976899999984888