HHsearch alignment for GI: 254780270 and conserved domain: PRK08903
>PRK08903 hypothetical protein; Validated.
Probab=98.77 E-value=6.6e-07 Score=71.13 Aligned_cols=178 Identities=14% Similarity=0.246 Sum_probs=118.2
Q ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHC---CCEEEEECCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEE
Q ss_conf 44673599860565650279999997708---824998618888888835632001456712899999832788739999
Q gi|254780270|r 363 KNKGLILCFVGPPGVGKTSLAQSIAKATG---RQYVRMSLGGVYDEADIRGHRRTYIGSMPGRIIQSLKRAKRSNPLLLL 439 (820)
Q Consensus 363 ~~~g~il~l~gppgvGKts~~~sia~al~---r~f~~islgg~~d~~~i~gh~~ty~ga~pg~ii~~l~~~~~~npv~~l 439 (820)
T Consensus 39 ~~~~~~l~i~G~~G~GKTHLl~a~~~~~~~~~~~~~yl~~~~~-----------------~----~~~~~~-~~~d~l~i 96 (227)
T PRK08903 39 PVADRFFYLWGEAGSGRSHLLQALVAAASEGGKNARYLDPASP-----------------L----LAFDFD-PRAELYAV 96 (227)
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCC-----------------H----HHHHHH-HCCCEEEE
T ss_conf 8878669998999998889999999999806997499651104-----------------5----777420-01898999
Q ss_pred ECHHHHHHHCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCCCEEEEEECCCC----CCCHHHCCCE---EEEEECCCCH
Q ss_conf 33155423117711556655406001681332010352364427999934865----5441311724---7998258786
Q gi|254780270|r 440 DEIDKMGSDLRGDPSAALLEVLDPAQNSSFVDHYLEVEYDLSDVMFIMTANTL----NIPLPLMDRM---EIIRIAGYTE 512 (820)
Q Consensus 440 deidk~~~~~~gdp~~allevldp~qn~~f~d~y~~~~~dls~v~fi~tan~~----~i~~~l~drm---e~i~~~~y~~ 512 (820)
T Consensus 97 DDi~~i~----~~~q~~lF~l~N~-------------~~~~~~~~ll~s~~~~p~~l~~~~DL~SRl~~gl~~~i~~pdd 159 (227)
T PRK08903 97 DDVERLD----DAQQIALFNLFNR-------------VRAHGKTALLVAGPAAPLALDVREDLRTRLGWGLVYEVKPLSD 159 (227)
T ss_pred ECCCCCC----CHHHHHHHHHHHH-------------HHHCCCCEEEECCCCCHHHCCCCHHHHHHHHCCCEEEEECCCH
T ss_conf 6411489----5699999999999-------------9972994899718997120120089999993897389979799
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHH
Q ss_conf 89998999860898998625781313228999999973177410234788879999898765421178520127967867
Q gi|254780270|r 513 EEKLQIAKNHLVKKVLTEHALKQEECCISDGVLLDIIRLFTHEAGVRSFERALMKIARKAVTKIVKNSDTTVSINENNLQ 592 (820)
Q Consensus 513 ~ek~~i~~~~l~p~~~~~~~~~~~~~~~~~~~i~~ii~~Yt~EaGvR~l~r~i~~i~r~~~~~~~~~~~~~~~i~~~~l~ 592 (820)
T Consensus 160 e~~~~iL~~~-----a~~-----rgl~l~~~v~~yl~~r~~R~--~~~L~~~l~~Ld~~sl~~-------kr~iTi~lvk 220 (227)
T PRK08903 160 EDKIAALKAA-----AAE-----RGLQLADEVPDYLLTHFRRD--MPSLMALLDALDRYSLEQ-------KRAVTLPLLR 220 (227)
T ss_pred HHHHHHHHHH-----HHH-----CCCCCCHHHHHHHHHHHCCC--HHHHHHHHHHHHHHHHHC-------CCCCCHHHHH
T ss_conf 9999999999-----996-----29999889999999983478--999999999999999982-------9999999999
Q ss_pred HHHCCC
Q ss_conf 530520
Q gi|254780270|r 593 DYLGVP 598 (820)
Q Consensus 593 ~~lg~~ 598 (820)
T Consensus 221 evLa~~ 226 (227)
T PRK08903 221 EMLAAP 226 (227)
T ss_pred HHHCCC
T ss_conf 985599