HHsearch alignment for GI: 254780270 and conserved domain: PRK10070
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional.
Probab=95.79 E-value=0.014 Score=38.34 Aligned_cols=126 Identities=25% Similarity=0.343 Sum_probs=61.6
Q ss_pred EEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCEEECCCCC---CCCCCCCHHHHHHHHHHHHH
Q ss_conf 997489972443256899999999999999998886299855742078147448888---47888730689999999998
Q gi|254780270|r 632 VIMPGKGEITITGNLKEIMKESILAASSYVRSKATTFGIIPSAFNEINIHVHVPEGA---TPKDGPSAGIAMATAIVSIM 708 (820)
Q Consensus 632 ~~~~g~g~l~lTG~lg~vmkES~~~A~s~~k~~~~~~~~~~~~~~~~diHih~p~Ga---~pKDGPSAGi~i~tal~S~~ 708 (820)
T Consensus 236 aVM~-~G~Ivq~GtpeeI~~~---Pa~~yV~~F~~~v~~-~~~~~a~~i~~~~~~~~~~~~~~~~~~~------a-l~~m 303 (400)
T PRK10070 236 AIMQ-NGEVVQVGTPDEILNN---PANDYVRTFFRGVDI-SQVFSAKDIARRTPNGLIRKTPGFGPRS------A-LKLL 303 (400)
T ss_pred EEEE-CCEEEEECCHHHHHHC---CCCHHHHHHHCCCCH-HHCEEHHHHHCCCCCCEEECCCCCCHHH------H-HHHH
T ss_conf 9998-9889997288999867---998689987554778-7702398962468752131488869999------9-9999
Q ss_pred HCCCCCCCCEEEEEEEECCEEEEECCHHHHHHHHHHCCCCEEECCHHHHHHHHHCCHHHH-CCCEEEECCCHHHHHHHHH
Q ss_conf 368887561066368503025000656899999997099699803677550776148877-0979998193999888760
Q gi|254780270|r 709 TCIPVYKNVAMTGELTLRGRVLPIGGLKEKLLAALRAGVTKVLIPEENIKDLMDIPENVK-NGLEIIPVSFMGEVLKHAL 787 (820)
Q Consensus 709 ~~~~v~~~iAmTGEitl~G~VlpiGGi~eK~laA~raGi~~viiP~~N~~d~~~ip~~~~-~~l~~~~v~~~~evl~~al 787 (820)
T Consensus 304 ~~~~~~~~~vvd~~~~~~G~v~----~-~~~~~~~~~~-----------~~~~---~~~~~~~~~v~~~~~l~~~~~~~~ 364 (400)
T PRK10070 304 QDEDREYGYVIERGNKFVGAVS----I-DSLKAALTQQ-----------QGLD---AALIDAPLAVDAQTPLSELLSHVG 364 (400)
T ss_pred HHCCCCEEEEECCCCEEEEEEE----H-HHHHHHHHCC-----------CCHH---HHHHCCCCCCCCCCCHHHHHHHHH
T ss_conf 8559867999869980889988----9-9999776337-----------7636---675058842399998999999997
Q ss_pred C
Q ss_conf 2
Q gi|254780270|r 788 L 788 (820)
Q Consensus 788 ~ 788 (820)
T Consensus 365 ~ 365 (400)
T PRK10070 365 Q 365 (400)
T ss_pred H
T ss_conf 2