HHsearch alignment for GI: 254780270 and conserved domain: PRK10416
>PRK10416 cell division protein FtsY; Provisional.
Probab=96.84 E-value=0.022 Score=36.82 Aligned_cols=164 Identities=21% Similarity=0.292 Sum_probs=89.9
Q ss_pred HHHHHHHHHHCCCCCCHHHHHHHHHHHHHH-HHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCH
Q ss_conf 467899985222478857888889999999-8753110257899999876540415876632210688998776652011
Q gi|254780270|r 266 DEISDFEARISKIRLSKEAREKALSELQKL-RQMNPLSAESSVVRNYLDWLLGVPWDKKSKTKKNLDFAIRILDQDHFGL 344 (820)
Q Consensus 266 ~Ei~el~~Ki~~~~lp~e~~~~~~kEl~rL-~~m~~~s~E~~v~r~Yld~~~~lPW~~~t~~~~dl~~a~~iLd~~hyGl 344 (820)
T Consensus 228 ~~~eeLEe~Li~aDvGv~tt~~ii~~l~~~~~~~~~~~~~---------------------------~l~~--------- 271 (499)
T PRK10416 228 DLFEELEEQLLIADVGVETTRKIITNLTEGASRKQLRDAE---------------------------ALYG--------- 271 (499)
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHH---------------------------HHHH---------
T ss_conf 9999999999972059999999999999999864799999---------------------------9999---------
Q ss_pred HHHHHHHHHHHHH--HHHCCCC-CCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHCCCCCCCCCCCCH
Q ss_conf 6899999999999--9842444-673599860565650279999997708824998618888888835632001456712
Q gi|254780270|r 345 EKVKERIIEYLAV--QMRVIKN-KGLILCFVGPPGVGKTSLAQSIAKATGRQYVRMSLGGVYDEADIRGHRRTYIGSMPG 421 (820)
Q Consensus 345 ~~vK~rile~lav--~~~~~~~-~g~il~l~gppgvGKts~~~sia~al~r~f~~islgg~~d~~~i~gh~~ty~ga~pg 421 (820)
T Consensus 272 -~l~~~~~~il~~~~~~l~~~~~~P~VIl~vGvNG~GKTTTigKLA~~~~~~gkkVllaA~-D---------TfRaA--- 337 (499)
T PRK10416 272 -LLKEEMGEILAKVDEPLNVEGKTPFVILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAG-D---------TFRAA--- 337 (499)
T ss_pred -HHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEE-C---------CCCHH---
T ss_conf -999999998731044665689998799997478787898999999999977995378840-6---------67568---
Q ss_pred HHHHHHHHCCCC--CEEEEEECHHHHHHHCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCHHHC
Q ss_conf 899999832788--739999331554231177115566554060016813320103523644279999348655441311
Q gi|254780270|r 422 RIIQSLKRAKRS--NPLLLLDEIDKMGSDLRGDPSAALLEVLDPAQNSSFVDHYLEVEYDLSDVMFIMTANTLNIPLPLM 499 (820)
Q Consensus 422 ~ii~~l~~~~~~--npv~~ldeidk~~~~~~gdp~~allevldp~qn~~f~d~y~~~~~dls~v~fi~tan~~~i~~~l~ 499 (820)
T Consensus 338 Ai-eQL~~w~~r~~v~vi--------~~~~g~Dpa~V~~dai~~a~~~~~------------DvviiDTAGRl~~~~~LM 396 (499)
T PRK10416 338 AV-EQLQVWGQRNNIPVI--------AQHTGADSASVIFDAIQAAKARNV------------DVLIADTAGRLQNKSHLM 396 (499)
T ss_pred HH-HHHHHHHCCCCCEEE--------ECCCCCCHHHHHHHHHHHHHHCCC------------CEEEEECCCCCCCCHHHH
T ss_conf 99-999998424573698--------368999979999999999997299------------989985776432609999
Q ss_pred C
Q ss_conf 7
Q gi|254780270|r 500 D 500 (820)
Q Consensus 500 d 500 (820)
T Consensus 397 ~ 397 (499)
T PRK10416 397 E 397 (499)
T ss_pred H
T ss_conf 9