HHsearch alignment for GI: 254780270 and conserved domain: PRK10787

>PRK10787 DNA-binding ATP-dependent protease La; Provisional.
Probab=100.00  E-value=0  Score=2210.86  Aligned_cols=777  Identities=58%  Similarity=0.933  Sum_probs=764.8

Q ss_pred             CCCCEEEEEEEECCCEECCCEEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHEECCCEEEEEEEEEECC
Q ss_conf             67763675663178256887143064294899999999997298499997368677788865602531489999979988
Q gi|254780270|r   22 GADGIIYPLLPLRDIVVFPYMIVPLFVGREKSVRALDEAMNSHKKIILVTQMNSNDENPIASSVYRIGTIVDIVQILRLP  101 (820)
Q Consensus        22 ~~~~~~LPIlPLrn~VLFPG~vlPL~V~eprsi~aIe~al~~d~~I~vV~qkD~~~e~p~~edLy~VGTlakI~qi~klp  101 (820)
T Consensus         5 ~~e~l~LPvLPLRd~VvFPgmviPL~VGR~kSI~AlE~A~~~d~~I~LVaQKD~~~deP~~eDLY~VGTlAkI~QviklP   84 (784)
T PRK10787          5 RSERIEIPVLPLRDVVVYPHMVIPLFVGREKSIRCLEAAMDHDKKIMLVAQKEASTDEPGVNDLFTVGTVASILQMLKLP   84 (784)
T ss_pred             CCCCCEEEEEEECCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHCCCCCEEEEEEEEEECC
T ss_conf             78862467998589102799205899688899999999996499799997568887999814522562799999967879


Q ss_pred             CCEEEEEEEEEEEEEEEEEEECCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHH
Q ss_conf             98099999975479999887079819999998048888847899999999999999998545577788876412688678
Q gi|254780270|r  102 DGTVKILVEGSVRARIVEYIEREDFLEAITQVLPDPTEDPVELEALSRSVIAEFSNYIKLNKKISPEVIGITSQIEGFSK  181 (820)
Q Consensus       102 DG~~~ILVeGl~RvkI~ei~~~~pyl~A~Ve~l~d~~~d~~eleAL~~~L~e~f~eli~l~~~i~~E~~~~l~~iddp~~  181 (820)
T Consensus        85 DG~vkVLVeGl~RvkI~~~~~~~pyl~A~Ve~l~~~~~d~~E~EAL~r~li~~f~~~v~l~~~ip~E~l~~l~~iddp~k  164 (784)
T PRK10787         85 DGTVKVLVEGLQRARISALSDNGEHFSAKAEYLESPTIDEREQEVLVRTAISQFEGYIKLNKKIPPEVLTSLNSIDDPAR  164 (784)
T ss_pred             CCCEEEEEEEEEEEEEEEEECCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHH
T ss_conf             99489999987789999997478968999998068888966899999999999999998576799999999983788899


Q ss_pred             HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCC
Q ss_conf             99998852358989999987432479999999999998655666777754333322233211221011110000101246
Q gi|254780270|r  182 LADVIAANLSIKVAERQKILEAVSVKERLEMLLVFMESEISVLQVEKRIRSRVKRQMEKTQREYYLHEQMKAIQKELDNG  261 (820)
Q Consensus       182 LAD~IAs~L~l~~eeKQeLLE~~Di~eRLe~Ll~lL~~EiEilkLq~eI~~kVk~kidk~QREyyLREQLKaIqkELGe~  261 (820)
T Consensus       165 LAD~IAs~L~ls~eeKQeLLE~~dvkeRLekll~lL~kElEileLe~kI~~kVkekm~K~QREyyLREQLkaIq~ELGe~  244 (784)
T PRK10787        165 LADTIAAHMPLKLADKQSVLEMSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEM  244 (784)
T ss_pred             HHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCC
T ss_conf             99998732799999999998638999999999999999999999999999999976406778999874102220220567


Q ss_pred             CCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf             65504678999852224788578888899999998753110257899999876540415876632210688998776652
Q gi|254780270|r  262 EEGRDEISDFEARISKIRLSKEAREKALSELQKLRQMNPLSAESSVVRNYLDWLLGVPWDKKSKTKKNLDFAIRILDQDH  341 (820)
Q Consensus       262 ed~~~Ei~el~~Ki~~~~lp~e~~~~~~kEl~rL~~m~~~s~E~~v~r~Yld~~~~lPW~~~t~~~~dl~~a~~iLd~~h  341 (820)
T Consensus       245 ~~~~~e~~~~~~ki~~~~~p~~~~~~~~~El~rl~~~~~~s~E~~v~r~YLd~l~~LPW~~~t~d~~dl~~A~~iLd~dH  324 (784)
T PRK10787        245 DDAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPWNARSKVKKDLRQAQEILDTDH  324 (784)
T ss_pred             CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf             64124899999999877999899999999999997189989418899999999975998888787569999999876543


Q ss_pred             HCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHCCCCCCCCCCCCH
Q ss_conf             01168999999999999842444673599860565650279999997708824998618888888835632001456712
Q gi|254780270|r  342 FGLEKVKERIIEYLAVQMRVIKNKGLILCFVGPPGVGKTSLAQSIAKATGRQYVRMSLGGVYDEADIRGHRRTYIGSMPG  421 (820)
Q Consensus       342 yGl~~vK~rile~lav~~~~~~~~g~il~l~gppgvGKts~~~sia~al~r~f~~islgg~~d~~~i~gh~~ty~ga~pg  421 (820)
T Consensus       325 yGL~~vKeRile~lAv~~~~~~~kg~IlclvGpPGvGKTSl~~sIA~al~r~f~rislGGv~DeaeirGHrrTYvgampG  404 (784)
T PRK10787        325 YGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTSLGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPG  404 (784)
T ss_pred             CCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHCCCCCCCCCCCCH
T ss_conf             06577999999999999862467787799646998772469999999858986998068878888825643343443683


Q ss_pred             HHHHHHHHCCCCCEEEEEECHHHHHHHCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCHHHCCC
Q ss_conf             89999983278873999933155423117711556655406001681332010352364427999934865544131172
Q gi|254780270|r  422 RIIQSLKRAKRSNPLLLLDEIDKMGSDLRGDPSAALLEVLDPAQNSSFVDHYLEVEYDLSDVMFIMTANTLNIPLPLMDR  501 (820)
Q Consensus       422 ~ii~~l~~~~~~npv~~ldeidk~~~~~~gdp~~allevldp~qn~~f~d~y~~~~~dls~v~fi~tan~~~i~~~l~dr  501 (820)
T Consensus       405 rii~~l~~a~~~nPv~llDEiDK~~~~~~Gdp~salLEvLDpeQN~~F~Dhyl~~~~DlS~v~Fi~TaN~~~ip~pLlDR  484 (784)
T PRK10787        405 KLIQKMAKVGVKNPLFLLDEIDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSNSMNIPAPLLDR  484 (784)
T ss_pred             HHHHHHHHHCCCCCEEEEHHHHHHCCCCCCCHHHHHHHHCCHHHCCCCCCCEEECCCCHHHEEEEEECCCCCCCHHHHHH
T ss_conf             89999997489885665003555224558998899998459765564000322046452225899732767787677631


Q ss_pred             EEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             47998258786899989998608989986257813132289999999731774102347888799998987654211785
Q gi|254780270|r  502 MEIIRIAGYTEEEKLQIAKNHLVKKVLTEHALKQEECCISDGVLLDIIRLFTHEAGVRSFERALMKIARKAVTKIVKNSD  581 (820)
Q Consensus       502 me~i~~~~y~~~ek~~i~~~~l~p~~~~~~~~~~~~~~~~~~~i~~ii~~Yt~EaGvR~l~r~i~~i~r~~~~~~~~~~~  581 (820)
T Consensus       485 mE~i~~~gYt~~eK~~Ia~~~l~p~~~~~~gl~~~~~~~~~~~~~~ii~~ytrEaGvR~ler~i~~i~rk~~~~~~~~~~  564 (784)
T PRK10787        485 MEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRSLEREISKLCRKAVKQLLLDKS  564 (784)
T ss_pred             EEEEEECCCCHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
T ss_conf             21554116767889999997453999998289965674399999998753365444251688999999999999970788


Q ss_pred             -CEECCCHHHHHHHHCCCCCCCCCHHCCCCCCCCCEEEECCCCCEEEEEEEEEECCCCCEEECCCHHHHHHHHHHHHHHH
Q ss_conf             -2012796786753052000332000223365000000000168079999999748997244325689999999999999
Q gi|254780270|r  582 -TTVSINENNLQDYLGVPRYKYGKIEGEDQVGIVTGLAWTEVGGEILTVEGVIMPGKGEITITGNLKEIMKESILAASSY  660 (820)
Q Consensus       582 -~~~~i~~~~l~~~lg~~~~~~~~~~~~~~~G~v~GLa~t~~GG~~l~IE~~~~~g~g~l~lTG~lg~vmkES~~~A~s~  660 (820)
T Consensus       565 ~~~~~i~~~~l~~~lg~~~~~~~~~~~~~~~Gv~~GLawt~~GG~~l~iE~~~~~gkg~l~lTG~lg~vmkES~~~A~s~  644 (784)
T PRK10787        565 LKHIEINGDNLHDYLGVQRFDYGRADNENRVGQVTGLAWTEVGGDLLTIETACVPGKGKLTYTGSLGEVMQESIQAALTV  644 (784)
T ss_pred             CCCEEECHHHHHHHHCCCCCCHHHHHCCCCCCEEEEEEEECCCCEEEEEEEEEECCCCCEEEECCCHHHHHHHHHHHHHH
T ss_conf             78558889999998299878812441368885799999815797689999998169886788624068999999999999


Q ss_pred             HHHHHHHCCCCHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCEEEEECCHHHHHH
Q ss_conf             99988862998557420781474488884788873068999999999836888756106636850302500065689999
Q gi|254780270|r  661 VRSKATTFGIIPSAFNEINIHVHVPEGATPKDGPSAGIAMATAIVSIMTCIPVYKNVAMTGELTLRGRVLPIGGLKEKLL  740 (820)
Q Consensus       661 ~k~~~~~~~~~~~~~~~~diHih~p~Ga~pKDGPSAGi~i~tal~S~~~~~~v~~~iAmTGEitl~G~VlpiGGi~eK~l  740 (820)
T Consensus       645 ~r~~~~~~~i~~~~~~~~diHiH~P~Ga~pKDGPSAGit~~tal~S~~~~~~v~~~~amTGEitL~G~VlpiGG~keK~l  724 (784)
T PRK10787        645 VRARAEKLGINPDFYEKRDIHVHVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLL  724 (784)
T ss_pred             HHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECEEEEEECCHHHHHH
T ss_conf             99989985899430126754895799999898742899999999999869998999655565660202782078999999


Q ss_pred             HHHHCCCCEEECCHHHHHHHHHCCHHHHCCCEEEECCCHHHHHHHHHCCCCCCCCCCC
Q ss_conf             9997099699803677550776148877097999819399988876027887655555
Q gi|254780270|r  741 AALRAGVTKVLIPEENIKDLMDIPENVKNGLEIIPVSFMGEVLKHALLRMPDPLESEG  798 (820)
Q Consensus       741 aA~raGi~~viiP~~N~~d~~~ip~~~~~~l~~~~v~~~~evl~~al~~~~~~~~~~~  798 (820)
T Consensus       725 aA~r~gi~~vi~P~~N~~d~~~ip~~v~~~l~~~~v~~~~ev~~~al~~~p~~~~~~~  782 (784)
T PRK10787        725 AAHRGGIKTVLIPFENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQNEPSGMQVVT  782 (784)
T ss_pred             HHHHCCCCEEEECHHHHHHHHHCCHHHHCCCEEEEECCHHHHHHHHHHCCCCCCCCCC
T ss_conf             9998499899945212355987499988698999939499999999756998861424