HHsearch alignment for GI: 254780270 and conserved domain: PRK10787
>PRK10787 DNA-binding ATP-dependent protease La; Provisional.
Probab=100.00 E-value=0 Score=2210.86 Aligned_cols=777 Identities=58% Similarity=0.933 Sum_probs=764.8
Q ss_pred CCCCEEEEEEEECCCEECCCEEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHEECCCEEEEEEEEEECC
Q ss_conf 67763675663178256887143064294899999999997298499997368677788865602531489999979988
Q gi|254780270|r 22 GADGIIYPLLPLRDIVVFPYMIVPLFVGREKSVRALDEAMNSHKKIILVTQMNSNDENPIASSVYRIGTIVDIVQILRLP 101 (820)
Q Consensus 22 ~~~~~~LPIlPLrn~VLFPG~vlPL~V~eprsi~aIe~al~~d~~I~vV~qkD~~~e~p~~edLy~VGTlakI~qi~klp 101 (820)
T Consensus 5 ~~e~l~LPvLPLRd~VvFPgmviPL~VGR~kSI~AlE~A~~~d~~I~LVaQKD~~~deP~~eDLY~VGTlAkI~QviklP 84 (784)
T PRK10787 5 RSERIEIPVLPLRDVVVYPHMVIPLFVGREKSIRCLEAAMDHDKKIMLVAQKEASTDEPGVNDLFTVGTVASILQMLKLP 84 (784)
T ss_pred CCCCCEEEEEEECCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHCCCCCEEEEEEEEEECC
T ss_conf 78862467998589102799205899688899999999996499799997568887999814522562799999967879
Q ss_pred CCEEEEEEEEEEEEEEEEEEECCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHH
Q ss_conf 98099999975479999887079819999998048888847899999999999999998545577788876412688678
Q gi|254780270|r 102 DGTVKILVEGSVRARIVEYIEREDFLEAITQVLPDPTEDPVELEALSRSVIAEFSNYIKLNKKISPEVIGITSQIEGFSK 181 (820)
Q Consensus 102 DG~~~ILVeGl~RvkI~ei~~~~pyl~A~Ve~l~d~~~d~~eleAL~~~L~e~f~eli~l~~~i~~E~~~~l~~iddp~~ 181 (820)
T Consensus 85 DG~vkVLVeGl~RvkI~~~~~~~pyl~A~Ve~l~~~~~d~~E~EAL~r~li~~f~~~v~l~~~ip~E~l~~l~~iddp~k 164 (784)
T PRK10787 85 DGTVKVLVEGLQRARISALSDNGEHFSAKAEYLESPTIDEREQEVLVRTAISQFEGYIKLNKKIPPEVLTSLNSIDDPAR 164 (784)
T ss_pred CCCEEEEEEEEEEEEEEEEECCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHH
T ss_conf 99489999987789999997478968999998068888966899999999999999998576799999999983788899
Q ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCC
Q ss_conf 99998852358989999987432479999999999998655666777754333322233211221011110000101246
Q gi|254780270|r 182 LADVIAANLSIKVAERQKILEAVSVKERLEMLLVFMESEISVLQVEKRIRSRVKRQMEKTQREYYLHEQMKAIQKELDNG 261 (820)
Q Consensus 182 LAD~IAs~L~l~~eeKQeLLE~~Di~eRLe~Ll~lL~~EiEilkLq~eI~~kVk~kidk~QREyyLREQLKaIqkELGe~ 261 (820)
T Consensus 165 LAD~IAs~L~ls~eeKQeLLE~~dvkeRLekll~lL~kElEileLe~kI~~kVkekm~K~QREyyLREQLkaIq~ELGe~ 244 (784)
T PRK10787 165 LADTIAAHMPLKLADKQSVLEMSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEM 244 (784)
T ss_pred HHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCC
T ss_conf 99998732799999999998638999999999999999999999999999999976406778999874102220220567
Q ss_pred CCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 65504678999852224788578888899999998753110257899999876540415876632210688998776652
Q gi|254780270|r 262 EEGRDEISDFEARISKIRLSKEAREKALSELQKLRQMNPLSAESSVVRNYLDWLLGVPWDKKSKTKKNLDFAIRILDQDH 341 (820)
Q Consensus 262 ed~~~Ei~el~~Ki~~~~lp~e~~~~~~kEl~rL~~m~~~s~E~~v~r~Yld~~~~lPW~~~t~~~~dl~~a~~iLd~~h 341 (820)
T Consensus 245 ~~~~~e~~~~~~ki~~~~~p~~~~~~~~~El~rl~~~~~~s~E~~v~r~YLd~l~~LPW~~~t~d~~dl~~A~~iLd~dH 324 (784)
T PRK10787 245 DDAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPWNARSKVKKDLRQAQEILDTDH 324 (784)
T ss_pred CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 64124899999999877999899999999999997189989418899999999975998888787569999999876543
Q ss_pred HCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHCCCCCCCCCCCCH
Q ss_conf 01168999999999999842444673599860565650279999997708824998618888888835632001456712
Q gi|254780270|r 342 FGLEKVKERIIEYLAVQMRVIKNKGLILCFVGPPGVGKTSLAQSIAKATGRQYVRMSLGGVYDEADIRGHRRTYIGSMPG 421 (820)
Q Consensus 342 yGl~~vK~rile~lav~~~~~~~~g~il~l~gppgvGKts~~~sia~al~r~f~~islgg~~d~~~i~gh~~ty~ga~pg 421 (820)
T Consensus 325 yGL~~vKeRile~lAv~~~~~~~kg~IlclvGpPGvGKTSl~~sIA~al~r~f~rislGGv~DeaeirGHrrTYvgampG 404 (784)
T PRK10787 325 YGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTSLGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPG 404 (784)
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHCCCCCCCCCCCCH
T ss_conf 06577999999999999862467787799646998772469999999858986998068878888825643343443683
Q ss_pred HHHHHHHHCCCCCEEEEEECHHHHHHHCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCHHHCCC
Q ss_conf 89999983278873999933155423117711556655406001681332010352364427999934865544131172
Q gi|254780270|r 422 RIIQSLKRAKRSNPLLLLDEIDKMGSDLRGDPSAALLEVLDPAQNSSFVDHYLEVEYDLSDVMFIMTANTLNIPLPLMDR 501 (820)
Q Consensus 422 ~ii~~l~~~~~~npv~~ldeidk~~~~~~gdp~~allevldp~qn~~f~d~y~~~~~dls~v~fi~tan~~~i~~~l~dr 501 (820)
T Consensus 405 rii~~l~~a~~~nPv~llDEiDK~~~~~~Gdp~salLEvLDpeQN~~F~Dhyl~~~~DlS~v~Fi~TaN~~~ip~pLlDR 484 (784)
T PRK10787 405 KLIQKMAKVGVKNPLFLLDEIDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSNSMNIPAPLLDR 484 (784)
T ss_pred HHHHHHHHHCCCCCEEEEHHHHHHCCCCCCCHHHHHHHHCCHHHCCCCCCCEEECCCCHHHEEEEEECCCCCCCHHHHHH
T ss_conf 89999997489885665003555224558998899998459765564000322046452225899732767787677631
Q ss_pred EEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 47998258786899989998608989986257813132289999999731774102347888799998987654211785
Q gi|254780270|r 502 MEIIRIAGYTEEEKLQIAKNHLVKKVLTEHALKQEECCISDGVLLDIIRLFTHEAGVRSFERALMKIARKAVTKIVKNSD 581 (820)
Q Consensus 502 me~i~~~~y~~~ek~~i~~~~l~p~~~~~~~~~~~~~~~~~~~i~~ii~~Yt~EaGvR~l~r~i~~i~r~~~~~~~~~~~ 581 (820)
T Consensus 485 mE~i~~~gYt~~eK~~Ia~~~l~p~~~~~~gl~~~~~~~~~~~~~~ii~~ytrEaGvR~ler~i~~i~rk~~~~~~~~~~ 564 (784)
T PRK10787 485 MEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRSLEREISKLCRKAVKQLLLDKS 564 (784)
T ss_pred EEEEEECCCCHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
T ss_conf 21554116767889999997453999998289965674399999998753365444251688999999999999970788
Q ss_pred -CEECCCHHHHHHHHCCCCCCCCCHHCCCCCCCCCEEEECCCCCEEEEEEEEEECCCCCEEECCCHHHHHHHHHHHHHHH
Q ss_conf -2012796786753052000332000223365000000000168079999999748997244325689999999999999
Q gi|254780270|r 582 -TTVSINENNLQDYLGVPRYKYGKIEGEDQVGIVTGLAWTEVGGEILTVEGVIMPGKGEITITGNLKEIMKESILAASSY 660 (820)
Q Consensus 582 -~~~~i~~~~l~~~lg~~~~~~~~~~~~~~~G~v~GLa~t~~GG~~l~IE~~~~~g~g~l~lTG~lg~vmkES~~~A~s~ 660 (820)
T Consensus 565 ~~~~~i~~~~l~~~lg~~~~~~~~~~~~~~~Gv~~GLawt~~GG~~l~iE~~~~~gkg~l~lTG~lg~vmkES~~~A~s~ 644 (784)
T PRK10787 565 LKHIEINGDNLHDYLGVQRFDYGRADNENRVGQVTGLAWTEVGGDLLTIETACVPGKGKLTYTGSLGEVMQESIQAALTV 644 (784)
T ss_pred CCCEEECHHHHHHHHCCCCCCHHHHHCCCCCCEEEEEEEECCCCEEEEEEEEEECCCCCEEEECCCHHHHHHHHHHHHHH
T ss_conf 78558889999998299878812441368885799999815797689999998169886788624068999999999999
Q ss_pred HHHHHHHCCCCHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCEEEEECCHHHHHH
Q ss_conf 99988862998557420781474488884788873068999999999836888756106636850302500065689999
Q gi|254780270|r 661 VRSKATTFGIIPSAFNEINIHVHVPEGATPKDGPSAGIAMATAIVSIMTCIPVYKNVAMTGELTLRGRVLPIGGLKEKLL 740 (820)
Q Consensus 661 ~k~~~~~~~~~~~~~~~~diHih~p~Ga~pKDGPSAGi~i~tal~S~~~~~~v~~~iAmTGEitl~G~VlpiGGi~eK~l 740 (820)
T Consensus 645 ~r~~~~~~~i~~~~~~~~diHiH~P~Ga~pKDGPSAGit~~tal~S~~~~~~v~~~~amTGEitL~G~VlpiGG~keK~l 724 (784)
T PRK10787 645 VRARAEKLGINPDFYEKRDIHVHVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLL 724 (784)
T ss_pred HHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECEEEEEECCHHHHHH
T ss_conf 99989985899430126754895799999898742899999999999869998999655565660202782078999999
Q ss_pred HHHHCCCCEEECCHHHHHHHHHCCHHHHCCCEEEECCCHHHHHHHHHCCCCCCCCCCC
Q ss_conf 9997099699803677550776148877097999819399988876027887655555
Q gi|254780270|r 741 AALRAGVTKVLIPEENIKDLMDIPENVKNGLEIIPVSFMGEVLKHALLRMPDPLESEG 798 (820)
Q Consensus 741 aA~raGi~~viiP~~N~~d~~~ip~~~~~~l~~~~v~~~~evl~~al~~~~~~~~~~~ 798 (820)
T Consensus 725 aA~r~gi~~vi~P~~N~~d~~~ip~~v~~~l~~~~v~~~~ev~~~al~~~p~~~~~~~ 782 (784)
T PRK10787 725 AAHRGGIKTVLIPFENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQNEPSGMQVVT 782 (784)
T ss_pred HHHHCCCCEEEECHHHHHHHHHCCHHHHCCCEEEEECCHHHHHHHHHHCCCCCCCCCC
T ss_conf 9998499899945212355987499988698999939499999999756998861424