HHsearch alignment for GI: 254780270 and conserved domain: PRK10867

>PRK10867 signal recognition particle protein; Provisional.
Probab=94.79  E-value=0.36  Score=27.67  Aligned_cols=105  Identities=23%  Similarity=0.308  Sum_probs=60.0

Q ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHC-CCEEEEECCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHCCC-CCEEEEEECH
Q ss_conf             673599860565650279999997708-82499861888888883563200145671289999983278-8739999331
Q gi|254780270|r  365 KGLILCFVGPPGVGKTSLAQSIAKATG-RQYVRMSLGGVYDEADIRGHRRTYIGSMPGRIIQSLKRAKR-SNPLLLLDEI  442 (820)
Q Consensus       365 ~g~il~l~gppgvGKts~~~sia~al~-r~f~~islgg~~d~~~i~gh~~ty~ga~pg~ii~~l~~~~~-~npv~~ldei  442 (820)
T Consensus        99 ~p~VIm~vGLqGsGKTTT~aKLA~~lk~k~~k~vllvaa-D---------t~R---paA~eQL~~la~~~~v~~~-----  160 (453)
T PRK10867         99 PPAVVLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVSA-D---------VYR---PAAIKQLETLAEQVGVDFF-----  160 (453)
T ss_pred             CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECC-C---------CCH---HHHHHHHHHHHHHCCCCEE-----
T ss_conf             996999974688851858999999999738983798558-8---------770---5899999999985198043-----


Q ss_pred             HHHHHHCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCHHHCCCE
Q ss_conf             554231177115566554060016813320103523644279999348655441311724
Q gi|254780270|r  443 DKMGSDLRGDPSAALLEVLDPAQNSSFVDHYLEVEYDLSDVMFIMTANTLNIPLPLMDRM  502 (820)
Q Consensus       443 dk~~~~~~gdp~~allevldp~qn~~f~d~y~~~~~dls~v~fi~tan~~~i~~~l~drm  502 (820)
T Consensus       161 ---~~~~~~dp~~ia~~a~~~ak~~~------------~DvvivDTAGRl~~d~~Lm~El  205 (453)
T PRK10867        161 ---PSDVGQKPVDIVNAALKEAKLKF------------YDVLLVDTAGRLHVDEAMMDEI  205 (453)
T ss_pred             ---CCCCCCCHHHHHHHHHHHHHHCC------------CCEEEEECCCCHHCCHHHHHHH
T ss_conf             ---67889988999999999999779------------9999997876012108889999