HHsearch alignment for GI: 254780270 and conserved domain: PRK12422

>PRK12422 chromosomal replication initiation protein; Provisional.
Probab=98.21  E-value=8.2e-06  Score=62.83  Aligned_cols=179  Identities=18%  Similarity=0.237  Sum_probs=107.2

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECHHHHHH
Q ss_conf             59986056565027999999770882499861888888883563200145671289999983278873999933155423
Q gi|254780270|r  368 ILCFVGPPGVGKTSLAQSIAKATGRQYVRMSLGGVYDEADIRGHRRTYIGSMPGRIIQSLKRAKRSNPLLLLDEIDKMGS  447 (820)
Q Consensus       368 il~l~gppgvGKts~~~sia~al~r~f~~islgg~~d~~~i~gh~~ty~ga~pg~ii~~l~~~~~~npv~~ldeidk~~~  447 (820)
T Consensus       143 PLfIyG~~GlGKTHLL~AIgn~i~~~~~kV~Y--vtae~F~~----~~v~ai~~~~~~~Fr~~yr~~DvLLIDDIQfl~g  216 (455)
T PRK12422        143 PIYLFGPEGSGKTHLMQAAVSALRESGGKILY--VSSELFTE----HLVSAIRSGEMQRFRSFYRNVDALFIEDIEVFSG  216 (455)
T ss_pred             CEEEECCCCCCHHHHHHHHHHHHHCCCCEEEE--ECHHHHHH----HHHHHHHCCCHHHHHHHHHCCCEEEEEHHHHHHC
T ss_conf             75887899997899999999985379986999--74999999----9999997588999999996388776314788728


Q ss_pred             HCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCCCEEEEEECC---CCC-CCHHHCCCEE---EEEECCCCHHHHHHHHH
Q ss_conf             1177115566554060016813320103523644279999348---655-4413117247---99825878689998999
Q gi|254780270|r  448 DLRGDPSAALLEVLDPAQNSSFVDHYLEVEYDLSDVMFIMTAN---TLN-IPLPLMDRME---IIRIAGYTEEEKLQIAK  520 (820)
Q Consensus       448 ~~~gdp~~allevldp~qn~~f~d~y~~~~~dls~v~fi~tan---~~~-i~~~l~drme---~i~~~~y~~~ek~~i~~  520 (820)
T Consensus       217 K~--~tqeEff~tfN-------------~L~~~~KQIVitsDr~P~el~~l~~RL~SRf~~GL~v~I~~Pd~etr~~Il~  281 (455)
T PRK12422        217 KG--ATQEEFFHTFN-------------SLHTEGKLIVISSSYAPGDLKAMEERLISRFEWGIAIPIHPLTREGLRSFLM  281 (455)
T ss_pred             CH--HHHHHHHHHHH-------------HHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHH
T ss_conf             48--89999999999-------------9998599699968989576512689999886376132168999899999999


Q ss_pred             HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             86089899862578131322899999997317741023478887999989876542117
Q gi|254780270|r  521 NHLVKKVLTEHALKQEECCISDGVLLDIIRLFTHEAGVRSFERALMKIARKAVTKIVKN  579 (820)
Q Consensus       521 ~~l~p~~~~~~~~~~~~~~~~~~~i~~ii~~Yt~EaGvR~l~r~i~~i~r~~~~~~~~~  579 (820)
T Consensus       282 ~-----k~~~~-----~~~l~~ev~~~iA~~i~~--niReLeGal~~l~~~~~~~~~~~  328 (455)
T PRK12422        282 R-----QAEQL-----SIRIEETALDFLIQALSS--NVKTLLHALTLLAKRVAYKKLSH  328 (455)
T ss_pred             H-----HHHHC-----CCCCCHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             9-----99871-----888844689999999755--17999999999999999871568