HHsearch alignment for GI: 254780270 and conserved domain: PTZ00112
>PTZ00112 origin recognition complex 1 protein; Provisional.
Probab=98.87 E-value=1.6e-07 Score=75.78 Aligned_cols=212 Identities=21% Similarity=0.311 Sum_probs=139.2
Q ss_pred HCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCC--------CEEEEECCCCCCH--------
Q ss_conf 011689999999999998424446735998605656502799999977088--------2499861888888--------
Q gi|254780270|r 342 FGLEKVKERIIEYLAVQMRVIKNKGLILCFVGPPGVGKTSLAQSIAKATGR--------QYVRMSLGGVYDE-------- 405 (820)
Q Consensus 342 yGl~~vK~rile~lav~~~~~~~~g~il~l~gppgvGKts~~~sia~al~r--------~f~~islgg~~d~-------- 405 (820)
T Consensus 270 pcRe~E~~~I~~Fie-~~i~q~GtG~cLYISGVPGTGKTATV~eVIr~L~~~~~~~~lp~F~fVEINGMkLt~P~qaY~~ 348 (650)
T PTZ00112 270 LGREKEAKEIRTFLE-TGIKQGGTGQILYISGVPGTGKTATVYMVIKELQNKKLKGQLPWFNLFEINGVNLVHPNAAYRV 348 (650)
T ss_pred CCCHHHHHHHHHHHH-HHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEECCCHHHHHHH
T ss_conf 770789999999998-6411688665699978999980036999999999999708999815999736377987889999
Q ss_pred --HHHCCCCCC-CCCCCCHHHHHHHHHCCCCCEEEEEECHHHHHHHCCCCHHHHHHHHCCCCCCCCEEEEECCCC-CCCC
Q ss_conf --883563200-145671289999983278873999933155423117711556655406001681332010352-3644
Q gi|254780270|r 406 --ADIRGHRRT-YIGSMPGRIIQSLKRAKRSNPLLLLDEIDKMGSDLRGDPSAALLEVLDPAQNSSFVDHYLEVE-YDLS 481 (820)
Q Consensus 406 --~~i~gh~~t-y~ga~pg~ii~~l~~~~~~npv~~ldeidk~~~~~~gdp~~allevldp~qn~~f~d~y~~~~-~dls 481 (820)
T Consensus 349 L~e~Ltg~k~~~~~~A--~~lL~k~F~~~r~p~VlLvDELD~LvTkkQ~----VlYNLFd-------------WPT~~~S 409 (650)
T PTZ00112 349 FYKKLFNKKPPNALNS--YKELDKLFNNNRTPSILIVDEADYIVTKTQK----VLFTLFD-------------WPTKKNS 409 (650)
T ss_pred HHHHHHCCCCCCHHHH--HHHHHHHHCCCCCCEEEEECHHHHHHHCCCC----EEEECCC-------------CCCCCCC
T ss_conf 9999848988867899--9999998268997189997157777636774----5777366-------------8898887
Q ss_pred CEEEEEECCCCCCCHHHC----CC--EEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCC
Q ss_conf 279999348655441311----72--479982587868999899986089899862578131322899999997317741
Q gi|254780270|r 482 DVMFIMTANTLNIPLPLM----DR--MEIIRIAGYTEEEKLQIAKNHLVKKVLTEHALKQEECCISDGVLLDIIRLFTHE 555 (820)
Q Consensus 482 ~v~fi~tan~~~i~~~l~----dr--me~i~~~~y~~~ek~~i~~~~l~p~~~~~~~~~~~~~~~~~~~i~~ii~~Yt~E 555 (820)
T Consensus 410 kLIVIaIANTMDLPERL~~RVsSRLGltRltF~PYt~~QL~eII~sRL-----~--~~----~~f~~dAIQl~ARKVAav 478 (650)
T PTZ00112 410 KLILIIISNTMDLPYKMKPSCRSRLAFGRLVFSPYKYQQIEKVIKERL-----E--NC----EIIDHTALQLCARRVTNY 478 (650)
T ss_pred EEEEEEEEECCCCCHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHH-----C--CC----CCCCHHHHHHHHHHHHHH
T ss_conf 079999850678606566665552288500439989999999999986-----2--67----778878999998888750
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHH
Q ss_conf 0234788879999898765421178520127967867
Q gi|254780270|r 556 AGVRSFERALMKIARKAVTKIVKNSDTTVSINENNLQ 592 (820)
Q Consensus 556 aGvR~l~r~i~~i~r~~~~~~~~~~~~~~~i~~~~l~ 592 (820)
T Consensus 479 SG--DARRAL-dICRRAvE-~~~~~----ki~~~~i~ 507 (650)
T PTZ00112 479 SG--DMRKAL-QICKLAFE-NKNGG----KITPRDMT 507 (650)
T ss_pred CC--HHHHHH-HHHHHHHH-HCCCC----EEEHHHHH
T ss_conf 31--489999-99999997-35687----34248999