HHsearch alignment for GI: 254780270 and conserved domain: PTZ00112

>PTZ00112 origin recognition complex 1 protein; Provisional.
Probab=98.87  E-value=1.6e-07  Score=75.78  Aligned_cols=212  Identities=21%  Similarity=0.311  Sum_probs=139.2

Q ss_pred             HCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCC--------CEEEEECCCCCCH--------
Q ss_conf             011689999999999998424446735998605656502799999977088--------2499861888888--------
Q gi|254780270|r  342 FGLEKVKERIIEYLAVQMRVIKNKGLILCFVGPPGVGKTSLAQSIAKATGR--------QYVRMSLGGVYDE--------  405 (820)
Q Consensus       342 yGl~~vK~rile~lav~~~~~~~~g~il~l~gppgvGKts~~~sia~al~r--------~f~~islgg~~d~--------  405 (820)
T Consensus       270 pcRe~E~~~I~~Fie-~~i~q~GtG~cLYISGVPGTGKTATV~eVIr~L~~~~~~~~lp~F~fVEINGMkLt~P~qaY~~  348 (650)
T PTZ00112        270 LGREKEAKEIRTFLE-TGIKQGGTGQILYISGVPGTGKTATVYMVIKELQNKKLKGQLPWFNLFEINGVNLVHPNAAYRV  348 (650)
T ss_pred             CCCHHHHHHHHHHHH-HHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEECCCHHHHHHH
T ss_conf             770789999999998-6411688665699978999980036999999999999708999815999736377987889999


Q ss_pred             --HHHCCCCCC-CCCCCCHHHHHHHHHCCCCCEEEEEECHHHHHHHCCCCHHHHHHHHCCCCCCCCEEEEECCCC-CCCC
Q ss_conf             --883563200-145671289999983278873999933155423117711556655406001681332010352-3644
Q gi|254780270|r  406 --ADIRGHRRT-YIGSMPGRIIQSLKRAKRSNPLLLLDEIDKMGSDLRGDPSAALLEVLDPAQNSSFVDHYLEVE-YDLS  481 (820)
Q Consensus       406 --~~i~gh~~t-y~ga~pg~ii~~l~~~~~~npv~~ldeidk~~~~~~gdp~~allevldp~qn~~f~d~y~~~~-~dls  481 (820)
T Consensus       349 L~e~Ltg~k~~~~~~A--~~lL~k~F~~~r~p~VlLvDELD~LvTkkQ~----VlYNLFd-------------WPT~~~S  409 (650)
T PTZ00112        349 FYKKLFNKKPPNALNS--YKELDKLFNNNRTPSILIVDEADYIVTKTQK----VLFTLFD-------------WPTKKNS  409 (650)
T ss_pred             HHHHHHCCCCCCHHHH--HHHHHHHHCCCCCCEEEEECHHHHHHHCCCC----EEEECCC-------------CCCCCCC
T ss_conf             9999848988867899--9999998268997189997157777636774----5777366-------------8898887


Q ss_pred             CEEEEEECCCCCCCHHHC----CC--EEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCC
Q ss_conf             279999348655441311----72--479982587868999899986089899862578131322899999997317741
Q gi|254780270|r  482 DVMFIMTANTLNIPLPLM----DR--MEIIRIAGYTEEEKLQIAKNHLVKKVLTEHALKQEECCISDGVLLDIIRLFTHE  555 (820)
Q Consensus       482 ~v~fi~tan~~~i~~~l~----dr--me~i~~~~y~~~ek~~i~~~~l~p~~~~~~~~~~~~~~~~~~~i~~ii~~Yt~E  555 (820)
T Consensus       410 kLIVIaIANTMDLPERL~~RVsSRLGltRltF~PYt~~QL~eII~sRL-----~--~~----~~f~~dAIQl~ARKVAav  478 (650)
T PTZ00112        410 KLILIIISNTMDLPYKMKPSCRSRLAFGRLVFSPYKYQQIEKVIKERL-----E--NC----EIIDHTALQLCARRVTNY  478 (650)
T ss_pred             EEEEEEEEECCCCCHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHH-----C--CC----CCCCHHHHHHHHHHHHHH
T ss_conf             079999850678606566665552288500439989999999999986-----2--67----778878999998888750


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHH
Q ss_conf             0234788879999898765421178520127967867
Q gi|254780270|r  556 AGVRSFERALMKIARKAVTKIVKNSDTTVSINENNLQ  592 (820)
Q Consensus       556 aGvR~l~r~i~~i~r~~~~~~~~~~~~~~~i~~~~l~  592 (820)
T Consensus       479 SG--DARRAL-dICRRAvE-~~~~~----ki~~~~i~  507 (650)
T PTZ00112        479 SG--DMRKAL-QICKLAFE-NKNGG----KITPRDMT  507 (650)
T ss_pred             CC--HHHHHH-HHHHHHHH-HCCCC----EEEHHHHH
T ss_conf             31--489999-99999997-35687----34248999