HHsearch alignment for GI: 254780270 and conserved domain: TIGR02237
>TIGR02237 recomb_radB DNA repair and recombination protein RadB; InterPro: IPR011939 This family consists exclusively of archaeal RadB protein, a homolog of bacterial RecA, eukaryotic RAD51 (IPR011941 from INTERPRO) and DMC1 (IPR011940 from INTERPRO), and archaeal RadA (IPR011938 from INTERPRO) ,, .; GO: 0003684 damaged DNA binding, 0005524 ATP binding, 0008094 DNA-dependent ATPase activity, 0006281 DNA repair, 0006310 DNA recombination.
Probab=95.08 E-value=0.018 Score=37.58 Aligned_cols=40 Identities=33% Similarity=0.639 Sum_probs=29.3
Q ss_pred CCCCEEEEECCCCCCHHHHHHHHH---HHHCCCEEEEECCC-CC
Q ss_conf 467359986056565027999999---77088249986188-88
Q gi|254780270|r 364 NKGLILCFVGPPGVGKTSLAQSIA---KATGRQYVRMSLGG-VY 403 (820)
Q Consensus 364 ~~g~il~l~gppgvGKts~~~sia---~al~r~f~~islgg-~~ 403 (820)
T Consensus 10 E~G~iTQiYGp~G~GKTn~c~~~a~~a~~~Gk~v~YiDTEGGLS 53 (223)
T TIGR02237 10 ERGIITQIYGPPGSGKTNICLILAVNAARQGKKVVYIDTEGGLS 53 (223)
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCH
T ss_conf 20358898758998678999999999986189589996289832