HHsearch alignment for GI: 254780270 and conserved domain: TIGR02653
>TIGR02653 Lon_rel_chp conserved hypothetical protein; InterPro: IPR013473 This entry describes a protein family of unknown function, about 690 residues in length, in which some members show C-terminal sequence similarity to IPR008269 from INTERPRO, which is the Lon protease C-terminal proteolytic domain, from MEROPS family S16. However, the annotated catalytic sites of Escherichia coli Lon protease are not conserved in members of this family. Members have a motif GP[RK][GS]TGKS, similar to the ATP-binding P-loop motif GxxGxGK[ST]..
Probab=99.64 E-value=3.5e-15 Score=133.75 Aligned_cols=180 Identities=24% Similarity=0.370 Sum_probs=158.6
Q ss_pred CCCCCCCCCEEEECCCC-CEEEEEEEEEECCCCCEEECC-CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCEEEC
Q ss_conf 22336500000000016-807999999974899724432-5689999999999999999888629985574207814744
Q gi|254780270|r 607 GEDQVGIVTGLAWTEVG-GEILTVEGVIMPGKGEITITG-NLKEIMKESILAASSYVRSKATTFGIIPSAFNEINIHVHV 684 (820)
Q Consensus 607 ~~~~~G~v~GLa~t~~G-G~~l~IE~~~~~g~g~l~lTG-~lg~vmkES~~~A~s~~k~~~~~~~~~~~~~~~~diHih~ 684 (820)
T Consensus 493 g~~~pG~vy~v~~~~~G~~GlYrfEvqv~AG~GK~~~sG~Gs~t~~KEsi~~aF~yfkgn~~~~s~~~-~f~~~dyhlhv 571 (677)
T TIGR02653 493 GLLKPGVVYAVTQNESGKVGLYRFEVQVVAGSGKHKVSGLGSNTTAKESIRVAFDYFKGNLKRISASA-KFSEKDYHLHV 571 (677)
T ss_pred CCCCCCEEEEEEECCCCCEEEEEEEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCEEE-EEECCCEEEEE
T ss_conf 78888728998655888563689888887347612232125663101678876677531342231467-87064007998
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCEEEEECCHHHHHHHHHHCCCCEEECCHHHHHHHHHCC
Q ss_conf 88884788873068999999999836888756106636850302500065689999999709969980367755077614
Q gi|254780270|r 685 PEGATPKDGPSAGIAMATAIVSIMTCIPVYKNVAMTGELTLRGRVLPIGGLKEKLLAALRAGVTKVLIPEENIKDLMDIP 764 (820)
Q Consensus 685 p~Ga~pKDGPSAGi~i~tal~S~~~~~~v~~~iAmTGEitl~G~VlpiGGi~eK~laA~raGi~~viiP~~N~~d~~~ip 764 (820)
T Consensus 572 ~dL~~~g~s~~~~laa~Ial~S~~~~~~vqeqmviLG~mtigG~i~~v~~La~~LQ~a~d~GAKr~liP~~sa~~i~~Vp 651 (677)
T TIGR02653 572 VDLHNTGVSTEASLAALIALCSALLKRPVQEQMVILGSMTIGGVIKPVQDLAGSLQLAMDSGAKRVLIPLSSARDILTVP 651 (677)
T ss_pred EEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCC
T ss_conf 71317885556789999999999861688875189863132540043555468899998618754740300244546378
Q ss_pred HHHHCCCEEEECCCHHHHHHHHH
Q ss_conf 88770979998193999888760
Q gi|254780270|r 765 ENVKNGLEIIPVSFMGEVLKHAL 787 (820)
Q Consensus 765 ~~~~~~l~~~~v~~~~evl~~al 787 (820)
T Consensus 652 ~elf~Kfq~sFy~dP~dAv~Kal 674 (677)
T TIGR02653 652 AELFSKFQISFYSDPVDAVYKAL 674 (677)
T ss_pred HHHEECCCEEECCCHHHHHHHHH
T ss_conf 52602243034378389999972