HHsearch alignment for GI: 254780270 and conserved domain: TIGR02881

>TIGR02881 spore_V_K stage V sporulation protein K; InterPro: IPR014232 Proteins in this entry include the stage V sporulation protein K (SpoVK), a close homologue of the Rubisco expression protein CbbX (IPR000470 from INTERPRO), and are members of an ATPase family associated with various cellular activities. These proteins are strictly limited to bacterial endospore-forming species, but are not found universally among members of this group; they are missing from the Clostridium species..
Probab=98.65  E-value=1.6e-06  Score=68.15  Aligned_cols=200  Identities=27%  Similarity=0.403  Sum_probs=128.9

Q ss_pred             HHCHHHHHHHHHHHHHHHHHC---------CCCCCCEEEEECCCCCCHHHHHHHHHHHHC----------CCEEEEECCC
Q ss_conf             201168999999999999842---------444673599860565650279999997708----------8249986188
Q gi|254780270|r  341 HFGLEKVKERIIEYLAVQMRV---------IKNKGLILCFVGPPGVGKTSLAQSIAKATG----------RQYVRMSLGG  401 (820)
Q Consensus       341 hyGl~~vK~rile~lav~~~~---------~~~~g~il~l~gppgvGKts~~~sia~al~----------r~f~~islgg  401 (820)
T Consensus         8 ~vGL~~vK~~i~EiYA~i~i~~kR~~~GLk~~~~~LHMiFKGNPGTGKTTVAR~~gklf~emnvL~KGH~iE~ER-----   82 (261)
T TIGR02881         8 LVGLDEVKELIKEIYAWIQINEKRKEEGLKTSKQVLHMIFKGNPGTGKTTVARLLGKLFKEMNVLSKGHLIEVER-----   82 (261)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEE-----
T ss_conf             048889999999999999998888751011488447877427866843899999999985337567886788762-----


Q ss_pred             CCCHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECHHHHHH----HCCCCHHHHHHHHCCCCCCCCEEEEECCCC
Q ss_conf             8888883563200145671289999983278873999933155423----117711556655406001681332010352
Q gi|254780270|r  402 VYDEADIRGHRRTYIGSMPGRIIQSLKRAKRSNPLLLLDEIDKMGS----DLRGDPSAALLEVLDPAQNSSFVDHYLEVE  477 (820)
Q Consensus       402 ~~d~~~i~gh~~ty~ga~pg~ii~~l~~~~~~npv~~ldeidk~~~----~~~gdp~~allevldp~qn~~f~d~y~~~~  477 (820)
T Consensus        83 ----ADLVG---EYIGHTAqkTRe~~kkA~--GGvLFiDEAYSLaRGGEKDFGKEAIDtLVK~mE-d~~~~l--------  144 (261)
T TIGR02881        83 ----ADLVG---EYIGHTAQKTREVIKKAL--GGVLFIDEAYSLARGGEKDFGKEAIDTLVKAME-DQRNEL--------  144 (261)
T ss_pred             ----CCCCC---CCCCCHHHHHHHHHHHHC--CCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH-HCCCCE--------
T ss_conf             ----22122---320300489999999863--880055777776148888766208889999876-156986--------


Q ss_pred             CCCCCEEEEEECCC-----CCCCHHHCCCEE-EEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH---
Q ss_conf             36442799993486-----554413117247-998258786899989998608989986257813132289999999---
Q gi|254780270|r  478 YDLSDVMFIMTANT-----LNIPLPLMDRME-IIRIAGYTEEEKLQIAKNHLVKKVLTEHALKQEECCISDGVLLDI---  548 (820)
Q Consensus       478 ~dls~v~fi~tan~-----~~i~~~l~drme-~i~~~~y~~~ek~~i~~~~l~p~~~~~~~~~~~~~~~~~~~i~~i---  548 (820)
T Consensus       145 -----vlILAGY~~EM~yFL~~NPGL~SRFPi~i~FPdY~~eeL~~Ia~~m~~~R----------eY~Lt~~A~~~lr~~  209 (261)
T TIGR02881       145 -----VLILAGYSDEMDYFLSLNPGLRSRFPISIDFPDYTVEELMEIAERMVKER----------EYKLTEEAKWKLREH  209 (261)
T ss_pred             -----EEEEECCHHHHHHHHHCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHH----------HHCCCHHHHHHHHHH
T ss_conf             -----89970876899998620779777665054188998889999999998646----------422578899999999


Q ss_pred             HHCCC----CCC----HHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             73177----410----2347888799998987654211785
Q gi|254780270|r  549 IRLFT----HEA----GVRSFERALMKIARKAVTKIVKNSD  581 (820)
Q Consensus       549 i~~Yt----~Ea----GvR~l~r~i~~i~r~~~~~~~~~~~  581 (820)
T Consensus       210 l~~~~~~~~~~~sNaR~vRN~---iE~AIR~QAvRlL~~~~  247 (261)
T TIGR02881       210 LAKVDQLSSREFSNARYVRNI---IEKAIRRQAVRLLKKSD  247 (261)
T ss_pred             HHHHHHHHHCCCCCCCHHHHH---HHHHHHHHHHHHHCCCC
T ss_conf             741244421005762012428---89999999987643464