HHsearch alignment for GI: 254780270 and conserved domain: TIGR02903

>TIGR02903 spore_lon_C ATP-dependent protease, Lon family; InterPro: IPR014252 This entry shows some relation to the widely distributed ATP-dependent protease La, also called Lon or LonA (IPR004815 from INTERPRO), but is more closely related to LonB (IPR014251 from INTERPRO), a LonA paralog found only in endospore-forming bacteria. Proteins in this entry are unassigned peptidases belonging to the MEROPS peptidase family S16 (lon protease family, clan SJ). They are restricted to a subset of endospore-forming species, and probably participate in the program of endospore formation. We propose the designation LonC..
Probab=100.00  E-value=0  Score=496.85  Aligned_cols=466  Identities=30%  Similarity=0.519  Sum_probs=344.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CCCCHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHH
Q ss_conf             99998655666777754333322233211221011-11000010124665504678999852224788578888899999
Q gi|254780270|r  215 VFMESEISVLQVEKRIRSRVKRQMEKTQREYYLHE-QMKAIQKELDNGEEGRDEISDFEARISKIRLSKEAREKALSELQ  293 (820)
Q Consensus       215 ~lL~~EiEilkLq~eI~~kVk~kidk~QREyyLRE-QLKaIqkELGe~ed~~~Ei~el~~Ki~~~~lp~e~~~~~~kEl~  293 (820)
T Consensus        76 ~~iad~~A~R~v~~~iE~~ve~~l~erq~~Yl-~Eir~~vlk~~~g~--En~sTLKkl-~~Le~----------------  135 (616)
T TIGR02903        76 DHIADILARRTVENEIERKVEKKLQERQNKYL-EEIRLQVLKEEKGP--ENSSTLKKL-ERLEK----------------  135 (616)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHCCCC--CHHHHHHHH-HHHHH----------------
T ss_conf             99999886433567889999999887666899-99988775205788--616788999-98752----------------


Q ss_pred             HHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHH--HHHHHHHHHHHHHCCCCCCCEEEE
Q ss_conf             998753110257899999876540415876632210688998776652011689--999999999998424446735998
Q gi|254780270|r  294 KLRQMNPLSAESSVVRNYLDWLLGVPWDKKSKTKKNLDFAIRILDQDHFGLEKV--KERIIEYLAVQMRVIKNKGLILCF  371 (820)
Q Consensus       294 rL~~m~~~s~E~~v~r~Yld~~~~lPW~~~t~~~~dl~~a~~iLd~~hyGl~~v--K~rile~lav~~~~~~~~g~il~l  371 (820)
T Consensus       136 -Lek~kl~~s~~slLR---------P~~----------------------f~EiVGQerAI~aL--laK~aSPfPQHiiL  181 (616)
T TIGR02903       136 -LEKKKLAKSIQSLLR---------PRA----------------------FSEIVGQERAIKAL--LAKLASPFPQHIIL  181 (616)
T ss_pred             -HHHHHHHHHHHHHCC---------CCC----------------------CCCCCCHHHHHHHH--HHHHCCCCCCCEEE
T ss_conf             -447889999998628---------766----------------------76433346899999--97631888660785


Q ss_pred             ECCCCCCHHHHHHHH---HHHHCC-------CEEEEE---------------CCCCCCHHHHCCCCCCCCCCCCHHHHHH
Q ss_conf             605656502799999---977088-------249986---------------1888888883563200145671289999
Q gi|254780270|r  372 VGPPGVGKTSLAQSI---AKATGR-------QYVRMS---------------LGGVYDEADIRGHRRTYIGSMPGRIIQS  426 (820)
Q Consensus       372 ~gppgvGKts~~~si---a~al~r-------~f~~is---------------lgg~~d~~~i~gh~~ty~ga~pg~ii~~  426 (820)
T Consensus       182 YGPPGVGKTTaARl~LEe~K~~~~tPF~~DA~FvEVDGtTLRWDPREvTNPLLGSVHD---------------P--IYQG  244 (616)
T TIGR02903       182 YGPPGVGKTTAARLALEEAKKLKNTPFAEDAPFVEVDGTTLRWDPREVTNPLLGSVHD---------------P--IYQG  244 (616)
T ss_pred             ECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCC---------------C--CCCC
T ss_conf             5733884789999987621368744761137857515762667741014776776257---------------6--5567


Q ss_pred             HHH----CCCCCE-----------EEEEECHHHHHHHCCCCH--HHHHHHHC------------CCCCCC--CEEEEEC-
Q ss_conf             983----278873-----------999933155423117711--55665540------------600168--1332010-
Q gi|254780270|r  427 LKR----AKRSNP-----------LLLLDEIDKMGSDLRGDP--SAALLEVL------------DPAQNS--SFVDHYL-  474 (820)
Q Consensus       427 l~~----~~~~np-----------v~~ldeidk~~~~~~gdp--~~allevl------------dp~qn~--~f~d~y~-  474 (820)
T Consensus       245 a~RDLAE~GvPEPk~GLVT~AHGGvLFIDEIGEL------D~lLQnKLLKVLEDKrV~F~SsYYDpdD~NvPkYIK~lFe  318 (616)
T TIGR02903       245 ARRDLAETGVPEPKLGLVTDAHGGVLFIDEIGEL------DPLLQNKLLKVLEDKRVEFSSSYYDPDDENVPKYIKKLFE  318 (616)
T ss_pred             CCHHHCCCCCCCCCCCCCCCCCCCEEEEECHHHH------HHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHC
T ss_conf             6401104787989898710047756765021122------2787632444322643665321248753786558888522


Q ss_pred             -CCCCCCCCEEEE---EECCCC-CCCHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
Q ss_conf             -352364427999---934865-544131172479982587868999899986089899862578131322899999997
Q gi|254780270|r  475 -EVEYDLSDVMFI---MTANTL-NIPLPLMDRMEIIRIAGYTEEEKLQIAKNHLVKKVLTEHALKQEECCISDGVLLDII  549 (820)
Q Consensus       475 -~~~~dls~v~fi---~tan~~-~i~~~l~drme~i~~~~y~~~ek~~i~~~~l~p~~~~~~~~~~~~~~~~~~~i~~ii  549 (820)
T Consensus       319 ~GAPAD-----FvLIGATTr~P~eINpALRSRCaEvfFePL~p~dI~~Iv~~-----AA~-----klnv~L~~g-V~e~I  382 (616)
T TIGR02903       319 EGAPAD-----FVLIGATTRDPEEINPALRSRCAEVFFEPLTPEDIKEIVLN-----AAE-----KLNVKLAEG-VEELI  382 (616)
T ss_pred             CCCCCC-----EEEECCCCCCHHHCCHHHHCCCCEEECCCCCHHHHHHHHHH-----HHH-----HCCCCCCCC-HHHHH
T ss_conf             688825-----68726615882440512330143132179887899999999-----888-----617700036-48787


Q ss_pred             HCCCCCCHHHHHHHHHHHHHHHHHHHHHCC--CCCEECCCHHHHHHHHCCCCC---CCCCHHCCCCCCCCCEEEECCCCC
Q ss_conf             317741023478887999989876542117--852012796786753052000---332000223365000000000168
Q gi|254780270|r  550 RLFTHEAGVRSFERALMKIARKAVTKIVKN--SDTTVSINENNLQDYLGVPRY---KYGKIEGEDQVGIVTGLAWTEVGG  624 (820)
Q Consensus       550 ~~Yt~EaGvR~l~r~i~~i~r~~~~~~~~~--~~~~~~i~~~~l~~~lg~~~~---~~~~~~~~~~~G~v~GLa~t~~GG  624 (820)
T Consensus       383 a~YTie-G-RkAvnILAD~Yg~~ly~~~~~~~~~d~~~I~~~dv~evv~~sRl~Py~~~~~~~~~EvG~vFGLGV~gy~G  460 (616)
T TIGR02903       383 ARYTIE-G-RKAVNILADVYGYALYKKAEALKEEDKVTITADDVKEVVQISRLSPYEKVKASDTYEVGHVFGLGVSGYLG  460 (616)
T ss_pred             HHCCCC-C-HHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHCCCCCHHHCCCCCCCCEEEEEECCCCCCCC
T ss_conf             214713-1-12223465467676530455567777426618677767753045750112468886304687042121002


Q ss_pred             EEEEEEEEEE----CCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCEEECCCCC-CCCCCCCHHHH
Q ss_conf             0799999997----489972443256899999999999999998886299855742078147448888-47888730689
Q gi|254780270|r  625 EILTVEGVIM----PGKGEITITGNLKEIMKESILAASSYVRSKATTFGIIPSAFNEINIHVHVPEGA-TPKDGPSAGIA  699 (820)
Q Consensus       625 ~~l~IE~~~~----~g~g~l~lTG~lg~vmkES~~~A~s~~k~~~~~~~~~~~~~~~~diHih~p~Ga-~pKDGPSAGi~  699 (820)
T Consensus       461 S~lEIEa~aF~A~~~GkG~~RfNdTAGSMaKDSvFNAasviR------k~T~~D~~~yD~HVNViGGG~I--DGPSAG~A  532 (616)
T TIGR02903       461 SVLEIEAVAFEAKEKGKGTVRFNDTAGSMAKDSVFNAASVIR------KITGKDLKDYDIHVNVIGGGRI--DGPSAGAA  532 (616)
T ss_pred             CEEEEEEEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHH------HHCCCCCCCCCEEEEEECCCCC--CCCCHHHH
T ss_conf             333555044237789950588615655303577898899986------5304683416517888527701--75325799


Q ss_pred             HHHHHHHHHHCCCCCCCCEEEEEEEECCEEEEECCHHHHHHHHHHCCCCEEECCHHHHHHHHHCCHHHHCCCEEEECCCH
Q ss_conf             99999999836888756106636850302500065689999999709969980367755077614887709799981939
Q gi|254780270|r  700 MATAIVSIMTCIPVYKNVAMTGELTLRGRVLPIGGLKEKLLAALRAGVTKVLIPEENIKDLMDIPENVKNGLEIIPVSFM  779 (820)
Q Consensus       700 i~tal~S~~~~~~v~~~iAmTGEitl~G~VlpiGGi~eK~laA~raGi~~viiP~~N~~d~~~ip~~~~~~l~~~~v~~~  779 (820)
T Consensus       533 i~~~~~SA~~~~p~rQDvAiTGEiS~~G~ikpVGGi~EKIYGAk~~gi~~V~~P~~N~kd---vPqg~-~~I~v~~v~~i  608 (616)
T TIGR02903       533 ITLCIISAILDKPIRQDVAITGEISLRGKIKPVGGIFEKIYGAKRAGIKTVVIPEDNLKD---VPQGL-KGIEVKAVKTI  608 (616)
T ss_pred             HHHHHHHHHCCCCCEEEEEEEEEEEEECEEEECCCCCCCCHHHHHCCCCEEECCCCCCCC---CCCCC-CCCEEEEECCH
T ss_conf             999999987089830225651038860216512663333214553474354367300213---56678-87158970518


Q ss_pred             HHHHHHHH
Q ss_conf             99888760
Q gi|254780270|r  780 GEVLKHAL  787 (820)
Q Consensus       780 ~evl~~al  787 (820)
T Consensus       609 EE~~~iv~  616 (616)
T TIGR02903       609 EELLEIVF  616 (616)
T ss_pred             HHHHHHHC
T ss_conf             98998609