HHsearch alignment for GI: 254780270 and conserved domain: TIGR02903
>TIGR02903 spore_lon_C ATP-dependent protease, Lon family; InterPro: IPR014252 This entry shows some relation to the widely distributed ATP-dependent protease La, also called Lon or LonA (IPR004815 from INTERPRO), but is more closely related to LonB (IPR014251 from INTERPRO), a LonA paralog found only in endospore-forming bacteria. Proteins in this entry are unassigned peptidases belonging to the MEROPS peptidase family S16 (lon protease family, clan SJ). They are restricted to a subset of endospore-forming species, and probably participate in the program of endospore formation. We propose the designation LonC..
Probab=100.00 E-value=0 Score=496.85 Aligned_cols=466 Identities=30% Similarity=0.519 Sum_probs=344.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CCCCHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHH
Q ss_conf 99998655666777754333322233211221011-11000010124665504678999852224788578888899999
Q gi|254780270|r 215 VFMESEISVLQVEKRIRSRVKRQMEKTQREYYLHE-QMKAIQKELDNGEEGRDEISDFEARISKIRLSKEAREKALSELQ 293 (820)
Q Consensus 215 ~lL~~EiEilkLq~eI~~kVk~kidk~QREyyLRE-QLKaIqkELGe~ed~~~Ei~el~~Ki~~~~lp~e~~~~~~kEl~ 293 (820)
T Consensus 76 ~~iad~~A~R~v~~~iE~~ve~~l~erq~~Yl-~Eir~~vlk~~~g~--En~sTLKkl-~~Le~---------------- 135 (616)
T TIGR02903 76 DHIADILARRTVENEIERKVEKKLQERQNKYL-EEIRLQVLKEEKGP--ENSSTLKKL-ERLEK---------------- 135 (616)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHCCCC--CHHHHHHHH-HHHHH----------------
T ss_conf 99999886433567889999999887666899-99988775205788--616788999-98752----------------
Q ss_pred HHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHH--HHHHHHHHHHHHHCCCCCCCEEEE
Q ss_conf 998753110257899999876540415876632210688998776652011689--999999999998424446735998
Q gi|254780270|r 294 KLRQMNPLSAESSVVRNYLDWLLGVPWDKKSKTKKNLDFAIRILDQDHFGLEKV--KERIIEYLAVQMRVIKNKGLILCF 371 (820)
Q Consensus 294 rL~~m~~~s~E~~v~r~Yld~~~~lPW~~~t~~~~dl~~a~~iLd~~hyGl~~v--K~rile~lav~~~~~~~~g~il~l 371 (820)
T Consensus 136 -Lek~kl~~s~~slLR---------P~~----------------------f~EiVGQerAI~aL--laK~aSPfPQHiiL 181 (616)
T TIGR02903 136 -LEKKKLAKSIQSLLR---------PRA----------------------FSEIVGQERAIKAL--LAKLASPFPQHIIL 181 (616)
T ss_pred -HHHHHHHHHHHHHCC---------CCC----------------------CCCCCCHHHHHHHH--HHHHCCCCCCCEEE
T ss_conf -447889999998628---------766----------------------76433346899999--97631888660785
Q ss_pred ECCCCCCHHHHHHHH---HHHHCC-------CEEEEE---------------CCCCCCHHHHCCCCCCCCCCCCHHHHHH
Q ss_conf 605656502799999---977088-------249986---------------1888888883563200145671289999
Q gi|254780270|r 372 VGPPGVGKTSLAQSI---AKATGR-------QYVRMS---------------LGGVYDEADIRGHRRTYIGSMPGRIIQS 426 (820)
Q Consensus 372 ~gppgvGKts~~~si---a~al~r-------~f~~is---------------lgg~~d~~~i~gh~~ty~ga~pg~ii~~ 426 (820)
T Consensus 182 YGPPGVGKTTaARl~LEe~K~~~~tPF~~DA~FvEVDGtTLRWDPREvTNPLLGSVHD---------------P--IYQG 244 (616)
T TIGR02903 182 YGPPGVGKTTAARLALEEAKKLKNTPFAEDAPFVEVDGTTLRWDPREVTNPLLGSVHD---------------P--IYQG 244 (616)
T ss_pred ECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCC---------------C--CCCC
T ss_conf 5733884789999987621368744761137857515762667741014776776257---------------6--5567
Q ss_pred HHH----CCCCCE-----------EEEEECHHHHHHHCCCCH--HHHHHHHC------------CCCCCC--CEEEEEC-
Q ss_conf 983----278873-----------999933155423117711--55665540------------600168--1332010-
Q gi|254780270|r 427 LKR----AKRSNP-----------LLLLDEIDKMGSDLRGDP--SAALLEVL------------DPAQNS--SFVDHYL- 474 (820)
Q Consensus 427 l~~----~~~~np-----------v~~ldeidk~~~~~~gdp--~~allevl------------dp~qn~--~f~d~y~- 474 (820)
T Consensus 245 a~RDLAE~GvPEPk~GLVT~AHGGvLFIDEIGEL------D~lLQnKLLKVLEDKrV~F~SsYYDpdD~NvPkYIK~lFe 318 (616)
T TIGR02903 245 ARRDLAETGVPEPKLGLVTDAHGGVLFIDEIGEL------DPLLQNKLLKVLEDKRVEFSSSYYDPDDENVPKYIKKLFE 318 (616)
T ss_pred CCHHHCCCCCCCCCCCCCCCCCCCEEEEECHHHH------HHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHC
T ss_conf 6401104787989898710047756765021122------2787632444322643665321248753786558888522
Q ss_pred -CCCCCCCCEEEE---EECCCC-CCCHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
Q ss_conf -352364427999---934865-544131172479982587868999899986089899862578131322899999997
Q gi|254780270|r 475 -EVEYDLSDVMFI---MTANTL-NIPLPLMDRMEIIRIAGYTEEEKLQIAKNHLVKKVLTEHALKQEECCISDGVLLDII 549 (820)
Q Consensus 475 -~~~~dls~v~fi---~tan~~-~i~~~l~drme~i~~~~y~~~ek~~i~~~~l~p~~~~~~~~~~~~~~~~~~~i~~ii 549 (820)
T Consensus 319 ~GAPAD-----FvLIGATTr~P~eINpALRSRCaEvfFePL~p~dI~~Iv~~-----AA~-----klnv~L~~g-V~e~I 382 (616)
T TIGR02903 319 EGAPAD-----FVLIGATTRDPEEINPALRSRCAEVFFEPLTPEDIKEIVLN-----AAE-----KLNVKLAEG-VEELI 382 (616)
T ss_pred CCCCCC-----EEEECCCCCCHHHCCHHHHCCCCEEECCCCCHHHHHHHHHH-----HHH-----HCCCCCCCC-HHHHH
T ss_conf 688825-----68726615882440512330143132179887899999999-----888-----617700036-48787
Q ss_pred HCCCCCCHHHHHHHHHHHHHHHHHHHHHCC--CCCEECCCHHHHHHHHCCCCC---CCCCHHCCCCCCCCCEEEECCCCC
Q ss_conf 317741023478887999989876542117--852012796786753052000---332000223365000000000168
Q gi|254780270|r 550 RLFTHEAGVRSFERALMKIARKAVTKIVKN--SDTTVSINENNLQDYLGVPRY---KYGKIEGEDQVGIVTGLAWTEVGG 624 (820)
Q Consensus 550 ~~Yt~EaGvR~l~r~i~~i~r~~~~~~~~~--~~~~~~i~~~~l~~~lg~~~~---~~~~~~~~~~~G~v~GLa~t~~GG 624 (820)
T Consensus 383 a~YTie-G-RkAvnILAD~Yg~~ly~~~~~~~~~d~~~I~~~dv~evv~~sRl~Py~~~~~~~~~EvG~vFGLGV~gy~G 460 (616)
T TIGR02903 383 ARYTIE-G-RKAVNILADVYGYALYKKAEALKEEDKVTITADDVKEVVQISRLSPYEKVKASDTYEVGHVFGLGVSGYLG 460 (616)
T ss_pred HHCCCC-C-HHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHCCCCCHHHCCCCCCCCEEEEEECCCCCCCC
T ss_conf 214713-1-12223465467676530455567777426618677767753045750112468886304687042121002
Q ss_pred EEEEEEEEEE----CCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCEEECCCCC-CCCCCCCHHHH
Q ss_conf 0799999997----489972443256899999999999999998886299855742078147448888-47888730689
Q gi|254780270|r 625 EILTVEGVIM----PGKGEITITGNLKEIMKESILAASSYVRSKATTFGIIPSAFNEINIHVHVPEGA-TPKDGPSAGIA 699 (820)
Q Consensus 625 ~~l~IE~~~~----~g~g~l~lTG~lg~vmkES~~~A~s~~k~~~~~~~~~~~~~~~~diHih~p~Ga-~pKDGPSAGi~ 699 (820)
T Consensus 461 S~lEIEa~aF~A~~~GkG~~RfNdTAGSMaKDSvFNAasviR------k~T~~D~~~yD~HVNViGGG~I--DGPSAG~A 532 (616)
T TIGR02903 461 SVLEIEAVAFEAKEKGKGTVRFNDTAGSMAKDSVFNAASVIR------KITGKDLKDYDIHVNVIGGGRI--DGPSAGAA 532 (616)
T ss_pred CEEEEEEEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHH------HHCCCCCCCCCEEEEEECCCCC--CCCCHHHH
T ss_conf 333555044237789950588615655303577898899986------5304683416517888527701--75325799
Q ss_pred HHHHHHHHHHCCCCCCCCEEEEEEEECCEEEEECCHHHHHHHHHHCCCCEEECCHHHHHHHHHCCHHHHCCCEEEECCCH
Q ss_conf 99999999836888756106636850302500065689999999709969980367755077614887709799981939
Q gi|254780270|r 700 MATAIVSIMTCIPVYKNVAMTGELTLRGRVLPIGGLKEKLLAALRAGVTKVLIPEENIKDLMDIPENVKNGLEIIPVSFM 779 (820)
Q Consensus 700 i~tal~S~~~~~~v~~~iAmTGEitl~G~VlpiGGi~eK~laA~raGi~~viiP~~N~~d~~~ip~~~~~~l~~~~v~~~ 779 (820)
T Consensus 533 i~~~~~SA~~~~p~rQDvAiTGEiS~~G~ikpVGGi~EKIYGAk~~gi~~V~~P~~N~kd---vPqg~-~~I~v~~v~~i 608 (616)
T TIGR02903 533 ITLCIISAILDKPIRQDVAITGEISLRGKIKPVGGIFEKIYGAKRAGIKTVVIPEDNLKD---VPQGL-KGIEVKAVKTI 608 (616)
T ss_pred HHHHHHHHHCCCCCEEEEEEEEEEEEECEEEECCCCCCCCHHHHHCCCCEEECCCCCCCC---CCCCC-CCCEEEEECCH
T ss_conf 999999987089830225651038860216512663333214553474354367300213---56678-87158970518
Q ss_pred HHHHHHHH
Q ss_conf 99888760
Q gi|254780270|r 780 GEVLKHAL 787 (820)
Q Consensus 780 ~evl~~al 787 (820)
T Consensus 609 EE~~~iv~ 616 (616)
T TIGR02903 609 EELLEIVF 616 (616)
T ss_pred HHHHHHHC
T ss_conf 98998609