HHsearch alignment for GI: 254780270 and conserved domain: TIGR03415
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=95.04 E-value=0.04 Score=34.94 Aligned_cols=44 Identities=25% Similarity=0.473 Sum_probs=31.7
Q ss_pred HHHHHHH----HHHHHHHCCC-CCCCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 9999999----9999984244-467359986056565027999999770
Q gi|254780270|r 347 VKERIIE----YLAVQMRVIK-NKGLILCFVGPPGVGKTSLAQSIAKAT 390 (820)
Q Consensus 347 vK~rile----~lav~~~~~~-~~g~il~l~gppgvGKts~~~sia~al 390 (820)
T Consensus 26 ~k~~i~~~tg~~vAV~dvsl~I~~GEi~~lvGpSGsGKSTLLr~i~GL~ 74 (382)
T TIGR03415 26 TREEILDETGLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLN 74 (382)
T ss_pred CHHHHHHHHCCEEEEECCEEEECCCCEEEEECCCCCHHHHHHHHHHCCC
T ss_conf 9899988339999896517488799899999999734999999997599