HHsearch alignment for GI: 254780270 and conserved domain: TIGR03596
>TIGR03596 GTPase_YlqF ribosome biogenesis GTP-binding protein YlqF. Members of this protein family are GTP-binding proteins involved in ribosome biogenesis, including the essential YlqF protein of Bacillus subtilis, which is an essential protein. They are related to Era, EngA, and other GTPases of ribosome biogenesis, but are circularly permuted. This family is not universal, and is not present in Escherichia coli, and so is not as well studied as some other GTPases. This model is built for bacterial members.
Probab=94.80 E-value=0.047 Score=34.37 Aligned_cols=53 Identities=34% Similarity=0.510 Sum_probs=34.8
Q ss_pred CCE-EEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEC
Q ss_conf 735-9986056565027999999770882499861888888883563200145671289999983278873999933
Q gi|254780270|r 366 GLI-LCFVGPPGVGKTSLAQSIAKATGRQYVRMSLGGVYDEADIRGHRRTYIGSMPGRIIQSLKRAKRSNPLLLLDE 441 (820)
Q Consensus 366 g~i-l~l~gppgvGKts~~~sia~al~r~f~~islgg~~d~~~i~gh~~ty~ga~pg~ii~~l~~~~~~npv~~lde 441 (820)
T Consensus 117 ~~i~v~vVG~PNVGKSSlIN~L----------------------~~~k~~~v~~~PG~T-r~~q~i~l~~~i~llDt 170 (276)
T TIGR03596 117 RPIRAMIVGIPNVGKSTLINRL----------------------AGKKVAKVGNRPGVT-KGQQWIKLSDGLELLDT 170 (276)
T ss_pred CCEEEEEECCCCCCHHHHHHHH----------------------HCCCEEEECCCCCCC-CEEEEEEECCCEEEECC
T ss_conf 8638999727987589999987----------------------367258777965421-02589995797799668