HHsearch alignment for GI: 254780270 and conserved domain: TIGR03600
>TIGR03600 phage_DnaB phage replicative helicase, DnaB family, HK022 subfamily. Members of this family are phage (or prophage-region) homologs of the bacterial homohexameric replicative helicase DnaB. Some phage may rely on host DnaB, while others encode their own verions. This model describes the largest phage-specific clade among the close homologs of DnaB, but there are, or course, other DnaB homologs from phage that fall outside the scope of this model.
Probab=95.05 E-value=0.12 Score=31.41 Aligned_cols=40 Identities=35% Similarity=0.420 Sum_probs=30.6
Q ss_pred CCCCCCCEEEEECCCCCCHHHHHHHHHH--H--HCCCEEEEECC
Q ss_conf 2444673599860565650279999997--7--08824998618
Q gi|254780270|r 361 VIKNKGLILCFVGPPGVGKTSLAQSIAK--A--TGRQYVRMSLG 400 (820)
Q Consensus 361 ~~~~~g~il~l~gppgvGKts~~~sia~--a--l~r~f~~islg 400 (820)
T Consensus 189 ~Gl~~g~LiIiaARPsmGKTafalnia~n~A~~~g~~Vl~fSLE 232 (421)
T TIGR03600 189 NGLVKGDLIVIGARPSMGKTTLALNIAENVALREGKPVLFFSLE 232 (421)
T ss_pred CCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECC
T ss_conf 69998868999854678745999999999998669838999257