HHsearch alignment for GI: 254780270 and conserved domain: cd01393

>cd01393 recA_like RecA is a bacterial enzyme which has roles in homologous recombination, DNA repair, and the induction of the SOS response. RecA couples ATP hydrolysis to DNA strand exchange. While prokaryotes have a single RecA protein, eukaryotes have multiple RecA homologs such as Rad51, DMC1 and Rad55/57. Archaea have the RecA-like homologs radA and radB.

Probab=94.23  E-value=0.051  Score=34.09  Aligned_cols=31  Identities=29%  Similarity=0.286  Sum_probs=25.1

Q ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHCCC
Q ss_conf             4467359986056565027999999770882
Q gi|254780270|r  363 KNKGLILCFVGPPGVGKTSLAQSIAKATGRQ  393 (820)
Q Consensus       363 ~~~g~il~l~gppgvGKts~~~sia~al~r~  393 (820)
T Consensus        16 ip~G~ItEi~G~~gsGKT~l~lqla~~~q~~   46 (226)
T cd01393          16 IPTGRITEIFGEFGSGKTQLCLQLAVEAQLP   46 (226)
T ss_pred             CCCCEEEEEECCCCCCHHHHHHHHHHHHHCC
T ss_conf             8888399999999998999999999998542