HHsearch alignment for GI: 254780270 and conserved domain: cd03221

>cd03221 ABCF_EF-3 ABCF_EF-3 Elongation factor 3 (EF-3) is a cytosolic protein required by fungal ribosomes for in vitro protein synthesis and for in vivo growth. EF-3 stimulates the binding of the EF-1: GTP: aa-tRNA ternary complex to the ribosomal A site by facilitated release of the deacylated tRNA from the E site. The reaction requires ATP hydrolysis. EF-3 contains two ATP nucleotide binding sequence (NBS) motifs. NBSI is sufficient for the intrinsic ATPase activity. NBSII is essential for the ribosome-stimulated functions.
Probab=96.56  E-value=0.01  Score=39.45  Aligned_cols=113  Identities=22%  Similarity=0.255  Sum_probs=63.7

Q ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHCCCCCCCCCCCCHHHHHHH--HHCCCC-CEEEEEE
Q ss_conf             4673599860565650279999997708824998618888888835632001456712899999--832788-7399993
Q gi|254780270|r  364 NKGLILCFVGPPGVGKTSLAQSIAKATGRQYVRMSLGGVYDEADIRGHRRTYIGSMPGRIIQSL--KRAKRS-NPLLLLD  440 (820)
Q Consensus       364 ~~g~il~l~gppgvGKts~~~sia~al~r~f~~islgg~~d~~~i~gh~~ty~ga~pg~ii~~l--~~~~~~-npv~~ld  440 (820)
T Consensus        24 ~~ge~~~l~G~NGsGKTTl~~~l~G~~~~~~G~i~~~~~--------~~i~y~~QLSgGqkqr~~la~al~~~p~iliLD   95 (144)
T cd03221          24 NPGDRIGLVGRNGAGKSTLLKLIAGELEPDEGIVTWGST--------VKIGYFEQLSGGEKMRLALAKLLLENPNLLLLD   95 (144)
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEECCC--------CEEEEEHHCCHHHHHHHHHHHHHCCCCCEEEEE
T ss_conf             799999999899984999999984898898509999996--------089987007999999999999972599899995


Q ss_pred             CHHHHHHHCCCCHHH--HHHHHCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCHHHCCCEEEEE
Q ss_conf             315542311771155--665540600168133201035236442799993486554413117247998
Q gi|254780270|r  441 EIDKMGSDLRGDPSA--ALLEVLDPAQNSSFVDHYLEVEYDLSDVMFIMTANTLNIPLPLMDRMEIIR  506 (820)
Q Consensus       441 eidk~~~~~~gdp~~--allevldp~qn~~f~d~y~~~~~dls~v~fi~tan~~~i~~~l~drme~i~  506 (820)
T Consensus        96 EP-----t~~LD~~~~~~i~~~l~----------------~~~~tii~vs-Hd~~~~~~~~drii~l~  141 (144)
T cd03221          96 EP-----TNHLDLESIEALEEALK----------------EYPGTVILVS-HDRYFLDQVATKIIELE  141 (144)
T ss_pred             CC-----CCCCCHHHHHHHHHHHH----------------HCCCEEEEEE-CCHHHHHHHCCEEEEEE
T ss_conf             77-----55589999999999999----------------7099999996-79899998799999992