HHsearch alignment for GI: 254780270 and conserved domain: cd03299
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=95.43 E-value=0.02 Score=37.25 Aligned_cols=38 Identities=29% Similarity=0.498 Sum_probs=30.1
Q ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCC
Q ss_conf 46735998605656502799999977088249986188
Q gi|254780270|r 364 NKGLILCFVGPPGVGKTSLAQSIAKATGRQYVRMSLGG 401 (820)
Q Consensus 364 ~~g~il~l~gppgvGKts~~~sia~al~r~f~~islgg 401 (820)
T Consensus 23 ~~Ge~~~iiGpSGsGKSTLlr~i~Gl~~p~~G~I~~~G 60 (235)
T cd03299 23 ERGDYFVILGPTGSGKSVLLETIAGFIKPDSGKILLNG 60 (235)
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHCCCCCCCEEEEECC
T ss_conf 89989999999963599999999749999965999999