HHsearch alignment for GI: 254780270 and conserved domain: pfam00448

>pfam00448 SRP54 SRP54-type protein, GTPase domain. This family includes relatives of the G-domain of the SRP54 family of proteins.

Probab=95.91  E-value=0.0065  Score=40.87  Aligned_cols=39  Identities=21%  Similarity=0.306  Sum_probs=24.2

Q ss_pred             CCEEEEECCCCCCHHHHHHHHHHHH---CCCEEEEECCCCCC
Q ss_conf             7359986056565027999999770---88249986188888
Q gi|254780270|r  366 GLILCFVGPPGVGKTSLAQSIAKAT---GRQYVRMSLGGVYD  404 (820)
Q Consensus       366 g~il~l~gppgvGKts~~~sia~al---~r~f~~islgg~~d  404 (820)
T Consensus         1 P~vi~lvGptGvGKTTTiaKLAa~~~~~~~~V~lit~Dt~R~   42 (196)
T pfam00448         1 PNVILLVGLQGSGKTTTIAKLAAYLKKQGKKVLLVAADTFRA   42 (196)
T ss_pred             CEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCH
T ss_conf             969999899999889999999999997799289997587768