HHsearch alignment for GI: 254780270 and conserved domain: pfam03308
>pfam03308 ArgK ArgK protein. The ArgK protein acts as an ATPase enzyme and as a kinase, and phosphorylates periplasmic binding proteins involved in the LAO (lysine, arginine, ornithine)/AO transport systems.
Probab=96.18 E-value=0.012 Score=39.00 Aligned_cols=114 Identities=23% Similarity=0.344 Sum_probs=59.4
Q ss_pred HCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCC------------C---HHHHCCCCCCCCCCCCHHHH
Q ss_conf 42444673599860565650279999997708824998618888------------8---88835632001456712899
Q gi|254780270|r 360 RVIKNKGLILCFVGPPGVGKTSLAQSIAKATGRQYVRMSLGGVY------------D---EADIRGHRRTYIGSMPGRII 424 (820)
Q Consensus 360 ~~~~~~g~il~l~gppgvGKts~~~sia~al~r~f~~islgg~~------------d---~~~i~gh~~ty~ga~pg~ii 424 (820)
T Consensus 23 ~~~~g~a~~iGiTG~PGaGKStli~~l~~~~~~~g~~vaVlAvDPSS~~sgGaiLGDr~RM~~~~~~~~vfiRs~~---- 98 (267)
T pfam03308 23 MPLTGRAHRVGITGVPGAGKSTLIEALGMELRRRGHRVAVLAVDPSSPFTGGSILGDRTRMQRLAVDPGAFIRSSP---- 98 (267)
T ss_pred HHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCEEEEECC----
T ss_conf 7435995599876899887999999999999968986899997899988886300107777650589985886457----
Q ss_pred HHHHHCCCCCEEEEEECHHHHHHHCCCCHHHHHHH---HCCCCCCCCEEEEECCCCCCCCCEEEEEECCCC--CCC-HHH
Q ss_conf 99983278873999933155423117711556655---406001681332010352364427999934865--544-131
Q gi|254780270|r 425 QSLKRAKRSNPLLLLDEIDKMGSDLRGDPSAALLE---VLDPAQNSSFVDHYLEVEYDLSDVMFIMTANTL--NIP-LPL 498 (820)
Q Consensus 425 ~~l~~~~~~npv~~ldeidk~~~~~~gdp~~alle---vldp~qn~~f~d~y~~~~~dls~v~fi~tan~~--~i~-~~l 498 (820)
T Consensus 99 ---------------------srg~lGGls~~t~~~i~llea------------aGf---D~IivETVGVGQsE~~v~~~ 142 (267)
T pfam03308 99 ---------------------SRGALGGLSRATREAILLLDA------------AGF---DVIIIETVGVGQSEVDIANM 142 (267)
T ss_pred ---------------------CCCCCCCCCHHHHHHHHHHHH------------CCC---CEEEEECCCCCCCCHHHHHH
T ss_conf ---------------------788888714769999999997------------799---99999247777530355541
Q ss_pred CCCEEEEEECCCCHH
Q ss_conf 172479982587868
Q gi|254780270|r 499 MDRMEIIRIAGYTEE 513 (820)
Q Consensus 499 ~drme~i~~~~y~~~ 513 (820)
T Consensus 143 aD~~llv~~Pg~GDe 157 (267)
T pfam03308 143 ADTFVLVTIPGGGDD 157 (267)
T ss_pred CCEEEEEECCCCCHH
T ss_conf 576899955887608